This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
SER 6
LYS 7
-0.0845
LYS 7
LEU 8
0.0319
LEU 8
LYS 9
-0.0991
LYS 9
PRO 10
-0.0193
PRO 10
GLU 11
-0.0192
GLU 11
VAL 12
0.0252
VAL 12
VAL 13
-0.0124
VAL 13
GLU 14
0.0038
GLU 14
GLU 15
-0.0220
GLU 15
LEU 16
0.0110
LEU 16
THR 17
0.0344
THR 17
ARG 18
-0.0065
ARG 18
LYS 19
-0.0027
LYS 19
THR 20
0.0003
THR 20
TYR 21
-0.0467
TYR 21
PHE 22
0.0622
PHE 22
THR 23
0.0007
THR 23
GLU 24
-0.0151
GLU 24
LYS 25
-0.0223
LYS 25
GLU 26
-0.0221
GLU 26
VAL 27
0.0079
VAL 27
GLN 28
0.0115
GLN 28
GLN 29
-0.1477
GLN 29
TRP 30
0.0419
TRP 30
TYR 31
-0.0556
TYR 31
LYS 32
0.0118
LYS 32
GLY 33
-0.1004
GLY 33
PHE 34
-0.0036
PHE 34
ILE 35
-0.0441
ILE 35
LYS 36
-0.0046
LYS 36
ASP 37
-0.0082
ASP 37
CYS 38
-0.0091
CYS 38
PRO 39
0.1047
PRO 39
SER 40
0.0401
SER 40
GLY 41
-0.0275
GLY 41
GLN 42
0.0784
GLN 42
LEU 43
0.0038
LEU 43
ASP 44
0.0194
ASP 44
ALA 45
0.0652
ALA 45
ALA 46
-0.0443
ALA 46
GLY 47
-0.0049
GLY 47
PHE 48
-0.0016
PHE 48
GLN 49
0.0236
GLN 49
LYS 50
-0.0345
LYS 50
ILE 51
-0.0127
ILE 51
TYR 52
-0.0527
TYR 52
LYS 53
0.0275
LYS 53
GLN 54
-0.0350
GLN 54
PHE 55
0.0456
PHE 55
PHE 56
-0.1927
PHE 56
PRO 57
0.0151
PRO 57
PHE 58
-0.1643
PHE 58
GLY 59
0.0531
GLY 59
ASP 60
0.0336
ASP 60
PRO 61
0.0180
PRO 61
THR 62
0.0192
THR 62
LYS 63
-0.0950
LYS 63
PHE 64
0.0107
PHE 64
ALA 65
0.0122
ALA 65
THR 66
-0.0202
THR 66
PHE 67
-0.0497
PHE 67
VAL 68
0.0605
VAL 68
PHE 69
0.0158
PHE 69
ASN 70
-0.0006
ASN 70
VAL 71
-0.0529
VAL 71
PHE 72
0.1511
PHE 72
ASP 73
-0.1107
ASP 73
GLU 74
-0.0217
GLU 74
ASN 75
-0.0188
ASN 75
LYS 76
0.0414
LYS 76
ASP 77
0.0200
ASP 77
GLY 78
0.0188
GLY 78
ARG 79
0.0482
ARG 79
ILE 80
-0.0138
ILE 80
GLU 81
0.0673
GLU 81
PHE 82
0.0923
PHE 82
SER 83
-0.0680
SER 83
GLU 84
0.1848
GLU 84
PHE 85
-0.0235
PHE 85
ILE 86
0.0319
ILE 86
GLN 87
0.0008
GLN 87
ALA 88
0.1580
ALA 88
LEU 89
-0.0028
LEU 89
SER 90
0.0009
SER 90
VAL 91
0.0770
VAL 91
THR 92
-0.0038
THR 92
SER 93
-0.0065
SER 93
ARG 94
0.0114
ARG 94
GLY 95
0.0726
GLY 95
THR 96
-0.0257
THR 96
LEU 97
-0.0776
LEU 97
ASP 98
0.0063
ASP 98
GLU 99
0.0112
GLU 99
LYS 100
0.0136
LYS 100
LEU 101
0.0114
LEU 101
ARG 102
-0.0154
ARG 102
TRP 103
-0.0229
TRP 103
ALA 104
0.0489
ALA 104
PHE 105
0.0123
PHE 105
LYS 106
-0.0138
LYS 106
LEU 107
-0.0173
LEU 107
TYR 108
0.0431
TYR 108
ASP 109
-0.0096
ASP 109
LEU 110
-0.0316
LEU 110
ASP 111
-0.0399
ASP 111
ASN 112
0.0322
ASN 112
ASP 113
-0.0052
ASP 113
GLY 114
-0.0178
GLY 114
TYR 115
0.0290
TYR 115
ILE 116
0.0052
ILE 116
THR 117
0.0096
THR 117
ARG 118
0.0571
ARG 118
ASN 119
-0.0329
ASN 119
GLU 120
0.0371
GLU 120
MET 121
0.0359
MET 121
LEU 122
0.0071
LEU 122
ASP 123
0.0307
ASP 123
ILE 124
-0.0136
ILE 124
VAL 125
0.0429
VAL 125
ASP 126
0.0039
ASP 126
ALA 127
-0.0049
ALA 127
ILE 128
0.0223
ILE 128
TYR 129
0.0088
TYR 129
GLN 130
0.0002
GLN 130
MET 131
-0.0270
MET 131
VAL 132
-0.0090
VAL 132
GLY 133
0.0037
GLY 133
ASN 134
-0.0176
ASN 134
THR 135
0.0131
THR 135
VAL 136
0.0044
VAL 136
GLU 137
-0.0553
GLU 137
LEU 138
0.0122
LEU 138
PRO 139
-0.0119
PRO 139
GLU 140
-0.0413
GLU 140
GLU 141
0.0566
GLU 141
GLU 142
-0.0284
GLU 142
ASN 143
-0.0228
ASN 143
THR 144
-0.0034
THR 144
PRO 145
0.0406
PRO 145
GLU 146
-0.0225
GLU 146
LYS 147
0.0251
LYS 147
ARG 148
-0.0279
ARG 148
VAL 149
-0.0068
VAL 149
ASP 150
0.0079
ASP 150
ARG 151
-0.0042
ARG 151
ILE 152
-0.0045
ILE 152
PHE 153
-0.0077
PHE 153
ALA 154
0.0135
ALA 154
MET 155
0.0019
MET 155
MET 156
0.0038
MET 156
ASP 157
-0.0033
ASP 157
LYS 158
-0.0035
LYS 158
ASN 159
-0.0127
ASN 159
ALA 160
0.0106
ALA 160
ASP 161
0.0036
ASP 161
GLY 162
-0.0158
GLY 162
LYS 163
0.0196
LYS 163
LEU 164
0.0067
LEU 164
THR 165
-0.0079
THR 165
LEU 166
0.0567
LEU 166
GLN 167
-0.0165
GLN 167
GLU 168
0.0028
GLU 168
PHE 169
0.0139
PHE 169
GLN 170
0.0021
GLN 170
GLU 171
0.0015
GLU 171
GLY 172
-0.0097
GLY 172
SER 173
0.0075
SER 173
LYS 174
-0.0024
LYS 174
ALA 175
-0.0446
ALA 175
ASP 176
-0.0066
ASP 176
PRO 177
0.0023
PRO 177
SER 178
0.0057
SER 178
ILE 179
0.0135
ILE 179
VAL 180
-0.0377
VAL 180
GLN 181
0.0368
GLN 181
ALA 182
0.0133
ALA 182
LEU 183
-0.0303
LEU 183
SER 184
-0.0050
SER 184
LEU 185
0.0411
LEU 185
TYR 186
-0.0943
TYR 186
ASP 187
-0.0788
ASP 187
GLY 188
-0.0136
GLY 188
LEU 189
-0.0036
LEU 189
VAL 190
0.0330
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.