This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ALA 2
-0.0120
ALA 2
SER 3
0.0574
SER 3
GLU 4
-0.0991
GLU 4
THR 5
-0.0864
THR 5
ASN 6
0.1289
ASN 6
PRO 7
0.0639
PRO 7
THR 8
-0.0394
THR 8
PHE 9
0.0063
PHE 9
GLU 10
-0.0065
GLU 10
VAL 11
-0.0080
VAL 11
GLY 12
0.0111
GLY 12
ASP 13
-0.0023
ASP 13
HIS 14
0.0026
HIS 14
GLU 15
-0.0021
GLU 15
ALA 16
-0.0097
ALA 16
PHE 17
0.0066
PHE 17
MET 18
0.0072
MET 18
GLU 19
-0.0036
GLU 19
PHE 20
-0.0470
PHE 20
ALA 21
-0.0177
ALA 21
LEU 22
0.0013
LEU 22
THR 23
-0.0274
THR 23
GLN 24
0.0085
GLN 24
ALA 25
-0.0312
ALA 25
LYS 26
0.0107
LYS 26
ARG 27
-0.0205
ARG 27
SER 28
-0.0947
SER 28
PRO 29
0.0071
PRO 29
PRO 30
-0.0065
PRO 30
ALA 31
-0.0084
ALA 31
GLY 32
-0.0086
GLY 32
ASN 33
0.0013
ASN 33
LYS 34
0.0017
LYS 34
PHE 35
0.0060
PHE 35
CYS 36
-0.0207
CYS 36
VAL 37
0.0033
VAL 37
GLY 38
-0.0036
GLY 38
ALA 39
0.0021
ALA 39
VAL 40
0.0009
VAL 40
LEU 41
-0.0035
LEU 41
VAL 42
-0.0131
VAL 42
ASP 43
-0.0065
ASP 43
ALA 44
0.0070
ALA 44
ALA 45
0.0139
ALA 45
LYS 46
-0.0019
LYS 46
GLY 47
0.0005
GLY 47
LYS 48
0.0192
LYS 48
VAL 49
-0.0100
VAL 49
LEU 50
-0.0139
LEU 50
SER 51
-0.0244
SER 51
THR 52
0.0034
THR 52
GLY 53
-0.0047
GLY 53
TYR 54
0.0001
TYR 54
SER 55
-0.0014
SER 55
LEU 56
0.0068
LEU 56
GLU 57
0.0004
GLU 57
TYR 58
0.0115
TYR 58
PRO 59
-0.0057
PRO 59
ARG 60
-0.0011
ARG 60
ASP 61
0.0006
ASP 61
TYR 62
-0.0042
TYR 62
LYS 63
0.0010
LYS 63
GLY 64
-0.0053
GLY 64
ASP 65
-0.0024
ASP 65
PRO 66
-0.0008
PRO 66
GLY 67
0.0001
GLY 67
THR 68
0.0011
THR 68
THR 69
-0.0004
THR 69
HIS 70
0.0010
HIS 70
ALA 71
-0.0007
ALA 71
GLU 72
-0.0016
GLU 72
GLN 73
-0.0008
GLN 73
CYS 74
0.0086
CYS 74
CYS 75
-0.0100
CYS 75
PHE 76
0.0086
PHE 76
ILE 77
-0.0078
ILE 77
LYS 78
0.0092
LYS 78
ILE 79
0.0119
ILE 79
ALA 80
-0.0002
ALA 80
ASP 81
-0.0041
ASP 81
GLU 82
-0.0132
GLU 82
HIS 83
0.0049
HIS 83
ASN 84
-0.0035
ASN 84
LEU 85
-0.0037
LEU 85
PRO 86
-0.0040
PRO 86
GLU 87
-0.0001
GLU 87
GLU 88
0.0040
GLU 88
ARG 89
-0.0024
ARG 89
ILE 90
0.0047
ILE 90
HIS 91
-0.0008
HIS 91
GLU 92
-0.0037
GLU 92
VAL 93
0.0043
VAL 93
LEU 94
-0.0045
LEU 94
PRO 95
-0.0174
PRO 95
PRO 96
0.0171
PRO 96
ASP 97
-0.0058
ASP 97
THR 98
-0.0017
THR 98
VAL 99
-0.0048
VAL 99
LEU 100
-0.0039
LEU 100
TYR 101
-0.0059
TYR 101
THR 102
0.0039
THR 102
THR 103
0.0030
THR 103
MET 104
-0.0085
MET 104
GLU 105
-0.0072
GLU 105
PRO 106
0.0012
PRO 106
CYS 107
0.0009
CYS 107
ASN 108
-0.0014
ASN 108
GLU 109
0.0012
GLU 109
ARG 110
-0.0003
ARG 110
LEU 111
0.0003
LEU 111
SER 112
0.0006
SER 112
GLY 113
-0.0025
GLY 113
ASN 114
0.0007
ASN 114
MET 115
-0.0023
MET 115
THR 116
-0.0007
THR 116
CYS 117
-0.0001
CYS 117
ALA 118
-0.0006
ALA 118
THR 119
-0.0023
THR 119
ARG 120
0.0026
ARG 120
ILE 121
-0.0048
ILE 121
LEU 122
0.0025
LEU 122
ARG 123
-0.0049
ARG 123
LEU 124
0.0029
LEU 124
LYS 125
-0.0001
LYS 125
GLY 126
-0.0008
GLY 126
ALA 127
0.0084
ALA 127
ILE 128
-0.0050
ILE 128
LYS 129
-0.0004
LYS 129
THR 130
-0.0121
THR 130
VAL 131
0.0004
VAL 131
TYR 132
-0.0076
TYR 132
VAL 133
0.0080
VAL 133
GLY 134
-0.0026
GLY 134
ILE 135
0.0032
ILE 135
ARG 136
-0.0047
ARG 136
GLU 137
0.0025
GLU 137
PRO 138
0.0017
PRO 138
GLY 139
-0.0043
GLY 139
THR 140
-0.0008
THR 140
PHE 141
0.0017
PHE 141
ILE 142
-0.0047
ILE 142
ALA 143
0.0003
ALA 143
ASN 144
-0.0004
ASN 144
ASN 145
0.0003
ASN 145
ASP 146
-0.0010
ASP 146
GLY 147
0.0016
GLY 147
GLN 148
0.0015
GLN 148
GLU 149
-0.0031
GLU 149
ARG 150
-0.0012
ARG 150
LEU 151
0.0035
LEU 151
GLU 152
-0.0006
GLU 152
ALA 153
-0.0027
ALA 153
ASN 154
0.0018
ASN 154
GLY 155
0.0027
GLY 155
VAL 156
-0.0008
VAL 156
LYS 157
-0.0092
LYS 157
VAL 158
-0.0002
VAL 158
VAL 159
-0.0056
VAL 159
TYR 160
-0.0018
TYR 160
PRO 161
0.0007
PRO 161
VAL 162
0.0021
VAL 162
GLU 163
-0.0009
GLU 163
HIS 164
-0.0011
HIS 164
TRP 165
-0.0038
TRP 165
ARG 166
-0.0015
ARG 166
ASP 167
0.0008
ASP 167
ARG 168
-0.0086
ARG 168
ILE 169
0.0030
ILE 169
THR 170
0.0015
THR 170
GLU 171
-0.0008
GLU 171
ILE 172
-0.0113
ILE 172
SER 173
-0.0026
SER 173
MET 174
-0.0044
MET 174
ALA 175
-0.0050
ALA 175
GLY 176
0.0003
GLY 176
HIS 177
-0.0059
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.