CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225530577246

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 0.0650
GLN 1ILE 2 -0.0677
ILE 2PRO 3 0.2208
PRO 3LEU 4 -0.1063
LEU 4CYS 5 -0.0019
CYS 5ALA 6 -0.0331
ALA 6ASN 7 0.3226
ASN 7LEU 8 -0.1618
LEU 8VAL 9 0.2628
VAL 9PRO 10 -0.0959
PRO 10VAL 11 0.0724
VAL 11PRO 12 0.1186
PRO 12ILE 13 -0.0324
ILE 13THR 14 0.0506
THR 14ASN 15 0.0882
ASN 15ALA 16 -0.0058
ALA 16THR 17 0.1168
THR 17LEU 18 -0.0292
LEU 18ASP 19 0.0462
ASP 19ARG 20 0.0436
ARG 20ILE 21 -0.0123
ILE 21THR 22 0.1008
THR 22GLY 23 -0.2237
GLY 23LYS 24 -0.1438
LYS 24TRP 25 -0.0002
TRP 25PHE 26 -0.0772
PHE 26TYR 27 -0.0370
TYR 27ILE 28 0.0430
ILE 28ALA 29 -0.1353
ALA 29SER 30 -0.0349
SER 30ALA 31 -0.0235
ALA 31PHE 32 -0.0462
PHE 32ARG 33 -0.0241
ARG 33ASN 34 -0.0931
ASN 34GLU 35 0.0198
GLU 35GLU 36 0.0293
GLU 36TYR 37 0.0241
TYR 37ASN 38 -0.1570
ASN 38LYS 39 0.0877
LYS 39SER 40 0.0938
SER 40VAL 41 -0.0766
VAL 41GLN 42 -0.0310
GLN 42GLU 43 0.1627
GLU 43ILE 44 -0.0814
ILE 44GLN 45 0.0150
GLN 45ALA 46 -0.0303
ALA 46THR 47 -0.1605
THR 47PHE 48 -0.0590
PHE 48PHE 49 -0.1048
PHE 49TYR 50 -0.0633
TYR 50PHE 51 -0.1115
PHE 51THR 52 0.0258
THR 52PRO 53 -0.2809
PRO 53ASN 54 -0.0269
ASN 54LYS 55 -0.0719
LYS 55THR 56 0.0037
THR 56GLU 57 0.0549
GLU 57ASP 58 0.0425
ASP 58THR 59 -0.1591
THR 59ILE 60 -0.0849
ILE 60PHE 61 -0.1400
PHE 61LEU 62 -0.1717
LEU 62ARG 63 -0.0269
ARG 63GLU 64 -0.2119
GLU 64TYR 65 -0.0561
TYR 65GLN 66 -0.0611
GLN 66THR 67 -0.1982
THR 67ARG 68 0.0300
ARG 68GLN 69 -0.0057
GLN 69ASN 70 0.0983
ASN 70GLN 71 -0.1006
GLN 71CYS 72 -0.0656
CYS 72PHE 73 -0.0528
PHE 73TYR 74 -0.2833
TYR 74ASN 75 -0.0799
ASN 75SER 76 -0.3600
SER 76SER 77 0.0972
SER 77TYR 78 -0.2006
TYR 78LEU 79 0.0461
LEU 79ASN 80 -0.0791
ASN 80VAL 81 -0.0056
VAL 81GLN 82 -0.0574
GLN 82ARG 83 -0.0398
ARG 83GLU 84 -0.0057
GLU 84ASN 85 0.0628
ASN 85GLY 86 -0.0800
GLY 86THR 87 -0.1098
THR 87VAL 88 0.0050
VAL 88SER 89 -0.1314
SER 89ARG 90 -0.0268
ARG 90TYR 91 0.0266
TYR 91GLU 92 0.0103
GLU 92GLY 93 0.0667
GLY 93GLY 94 0.0098
GLY 94ARG 95 -0.0631
ARG 95GLU 96 -0.0880
GLU 96HIS 97 -0.0234
HIS 97VAL 98 -0.4080
VAL 98ALA 99 -0.1993
ALA 99HIS 100 -0.2956
HIS 100LEU 101 0.3206
LEU 101LEU 102 -0.0140
LEU 102PHE 103 -0.1141
PHE 103LEU 104 -0.1148
LEU 104ARG 105 -0.1118
ARG 105ASP 106 0.0995
ASP 106THR 107 -0.1486
THR 107LYS 108 0.0826
LYS 108THR 109 0.0202
THR 109LEU 110 -0.0612
LEU 110MET 111 0.0435
MET 111PHE 112 0.0077
PHE 112GLY 113 0.2430
GLY 113SER 114 -0.1090
SER 114TYR 115 0.1531
TYR 115LEU 116 -0.4309
LEU 116ASP 117 -0.0492
ASP 117ASP 118 0.2172
ASP 118GLU 119 -0.0495
GLU 119LYS 120 -0.0643
LYS 120ASN 121 -0.0048
ASN 121TRP 122 -0.0580
TRP 122GLY 123 0.0041
GLY 123LEU 124 0.0111
LEU 124SER 125 0.0444
SER 125PHE 126 0.0151
PHE 126TYR 127 0.0099
TYR 127ALA 128 0.0062
ALA 128ASP 129 -0.0651
ASP 129LYS 130 0.0362
LYS 130PRO 131 0.0905
PRO 131GLU 132 0.0098
GLU 132THR 133 0.1560
THR 133THR 134 0.1225
THR 134LYS 135 0.0030
LYS 135GLU 136 -0.0093
GLU 136GLN 137 -0.0574
GLN 137LEU 138 -0.1352
LEU 138GLY 139 0.0943
GLY 139GLU 140 -0.0284
GLU 140PHE 141 0.0874
PHE 141TYR 142 -0.0088
TYR 142GLU 143 0.6103
GLU 143ALA 144 -0.0459
ALA 144LEU 145 0.1398
LEU 145ASP 146 0.0535
ASP 146CYS 147 0.0447
CYS 147LEU 148 -0.3688
LEU 148ARG 149 0.2056
ARG 149ILE 150 -0.1713
ILE 150PRO 151 0.0415
PRO 151ARG 152 -0.2356
ARG 152SER 153 0.1004
SER 153ASP 154 0.1404
ASP 154VAL 155 -0.1177
VAL 155MET 156 0.2464
MET 156TYR 157 -0.1606
TYR 157THR 158 -0.0400
THR 158ASP 159 -0.0639
ASP 159TRP 160 0.0152
TRP 160LYS 161 0.0059
LYS 161LYS 162 0.0382
LYS 162ASP 163 0.0323
ASP 163LYS 164 -0.0229
LYS 164CYS 165 -0.0009
CYS 165GLU 166 0.1249
GLU 166PRO 167 -0.1106
PRO 167LEU 168 -0.0591
LEU 168GLU 169 -0.0060
GLU 169LYS 170 -0.0456
LYS 170GLN 171 -0.1058
GLN 171HIS 172 0.0447
HIS 172GLU 173 -0.1016
GLU 173LYS 174 0.0555
LYS 174GLU 175 0.0056
GLU 175ARG 176 -0.0795
ARG 176LYS 177 -0.1236
LYS 177GLN 178 0.1649

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.