CNRS Nantes University US2B US2B
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***  TRANSPORT PROTEIN 21-OCT-10 3APX  ***

CA strain for 240110225530577246

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0GLN 1 -0.0295
GLN 1ILE 2 0.0582
ILE 2PRO 3 -0.1714
PRO 3LEU 4 0.1046
LEU 4CYS 5 0.0668
CYS 5ALA 6 0.0122
ALA 6ASN 7 -0.2051
ASN 7LEU 8 -0.1228
LEU 8VAL 9 -0.0397
VAL 9PRO 10 0.4288
PRO 10VAL 11 -0.0745
VAL 11PRO 12 0.0762
PRO 12ILE 13 0.0272
ILE 13THR 14 -0.0876
THR 14ASN 15 -0.0642
ASN 15ALA 16 0.0789
ALA 16THR 17 -0.0620
THR 17LEU 18 0.0903
LEU 18ASP 19 -0.0145
ASP 19ARG 20 0.1810
ARG 20ILE 21 0.0105
ILE 21THR 22 -0.0161
THR 22GLY 23 -0.0549
GLY 23LYS 24 0.0024
LYS 24TRP 25 -0.0222
TRP 25PHE 26 0.0383
PHE 26TYR 27 0.0795
TYR 27ILE 28 -0.0432
ILE 28ALA 29 0.1063
ALA 29SER 30 0.0404
SER 30ALA 31 0.1306
ALA 31PHE 32 0.0034
PHE 32ARG 33 0.0292
ARG 33ASN 34 0.0744
ASN 34GLU 35 -0.0298
GLU 35GLU 36 0.0403
GLU 36TYR 37 -0.0412
TYR 37ASN 38 -0.4148
ASN 38LYS 39 0.1040
LYS 39SER 40 -0.0040
SER 40VAL 41 -0.1827
VAL 41GLN 42 0.0113
GLN 42GLU 43 0.0270
GLU 43ILE 44 -0.1435
ILE 44GLN 45 0.2855
GLN 45ALA 46 -0.0035
ALA 46THR 47 -0.0448
THR 47PHE 48 0.0367
PHE 48PHE 49 -0.0211
PHE 49TYR 50 0.0028
TYR 50PHE 51 -0.0194
PHE 51THR 52 0.0009
THR 52PRO 53 -0.0312
PRO 53ASN 54 0.0918
ASN 54LYS 55 -0.0345
LYS 55THR 56 0.0822
THR 56GLU 57 -0.0415
GLU 57ASP 58 -0.0087
ASP 58THR 59 0.0571
THR 59ILE 60 0.0074
ILE 60PHE 61 0.0181
PHE 61LEU 62 -0.0560
LEU 62ARG 63 0.0675
ARG 63GLU 64 -0.1303
GLU 64TYR 65 0.0528
TYR 65GLN 66 -0.0888
GLN 66THR 67 -0.0915
THR 67ARG 68 0.0286
ARG 68GLN 69 0.0063
GLN 69ASN 70 0.1037
ASN 70GLN 71 -0.0222
GLN 71CYS 72 0.0160
CYS 72PHE 73 -0.0255
PHE 73TYR 74 -0.2008
TYR 74ASN 75 0.0783
ASN 75SER 76 -0.1037
SER 76SER 77 0.1543
SER 77TYR 78 0.0543
TYR 78LEU 79 0.0196
LEU 79ASN 80 0.1120
ASN 80VAL 81 0.0662
VAL 81GLN 82 0.0659
GLN 82ARG 83 -0.0663
ARG 83GLU 84 -0.0097
GLU 84ASN 85 -0.0594
ASN 85GLY 86 0.0176
GLY 86THR 87 0.0888
THR 87VAL 88 0.0938
VAL 88SER 89 0.0871
SER 89ARG 90 0.0575
ARG 90TYR 91 0.0835
TYR 91GLU 92 -0.0098
GLU 92GLY 93 -0.0804
GLY 93GLY 94 0.0460
GLY 94ARG 95 0.0062
ARG 95GLU 96 0.0987
GLU 96HIS 97 -0.1473
HIS 97VAL 98 0.2333
VAL 98ALA 99 0.0889
ALA 99HIS 100 0.2677
HIS 100LEU 101 -0.1773
LEU 101LEU 102 0.1298
LEU 102PHE 103 -0.0150
PHE 103LEU 104 0.1880
LEU 104ARG 105 0.0888
ARG 105ASP 106 -0.1529
ASP 106THR 107 0.2282
THR 107LYS 108 -0.0937
LYS 108THR 109 0.0070
THR 109LEU 110 0.0604
LEU 110MET 111 -0.0232
MET 111PHE 112 -0.0239
PHE 112GLY 113 0.0923
GLY 113SER 114 -0.1044
SER 114TYR 115 0.0715
TYR 115LEU 116 0.0082
LEU 116ASP 117 -0.0183
ASP 117ASP 118 -0.0135
ASP 118GLU 119 -0.0233
GLU 119LYS 120 0.0486
LYS 120ASN 121 0.0032
ASN 121TRP 122 0.0059
TRP 122GLY 123 0.0444
GLY 123LEU 124 0.0411
LEU 124SER 125 0.1303
SER 125PHE 126 0.0201
PHE 126TYR 127 0.0249
TYR 127ALA 128 0.0049
ALA 128ASP 129 0.0756
ASP 129LYS 130 0.0147
LYS 130PRO 131 -0.0483
PRO 131GLU 132 -0.0789
GLU 132THR 133 -0.4138
THR 133THR 134 -0.0851
THR 134LYS 135 -0.0417
LYS 135GLU 136 0.0443
GLU 136GLN 137 0.0551
GLN 137LEU 138 0.1451
LEU 138GLY 139 -0.1541
GLY 139GLU 140 0.1835
GLU 140PHE 141 -0.0374
PHE 141TYR 142 0.0633
TYR 142GLU 143 -0.2126
GLU 143ALA 144 0.0725
ALA 144LEU 145 0.0132
LEU 145ASP 146 0.0495
ASP 146CYS 147 0.0248
CYS 147LEU 148 0.1323
LEU 148ARG 149 0.0009
ARG 149ILE 150 0.0845
ILE 150PRO 151 -0.0443
PRO 151ARG 152 -0.0232
ARG 152SER 153 0.0846
SER 153ASP 154 -0.1017
ASP 154VAL 155 0.0529
VAL 155MET 156 0.0758
MET 156TYR 157 0.0600
TYR 157THR 158 -0.0838
THR 158ASP 159 -0.0373
ASP 159TRP 160 0.1301
TRP 160LYS 161 -0.0185
LYS 161LYS 162 -0.0911
LYS 162ASP 163 0.1631
ASP 163LYS 164 -0.1762
LYS 164CYS 165 0.0682
CYS 165GLU 166 0.1324
GLU 166PRO 167 -0.1731
PRO 167LEU 168 0.0560
LEU 168GLU 169 -0.0103
GLU 169LYS 170 -0.0658
LYS 170GLN 171 -0.0680
GLN 171HIS 172 0.0736
HIS 172GLU 173 -0.1167
GLU 173LYS 174 0.0302
LYS 174GLU 175 0.0357
GLU 175ARG 176 0.0279
ARG 176LYS 177 -0.0361
LYS 177GLN 178 0.1821

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.