CNRS Nantes University US2B US2B
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***  TRANSCRIPTION/DNA 28-JUN-93 1GAT  ***

CA strain for 2401041811253864911

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ARG 2 0.0215
ARG 2ALA 3 -0.0962
ALA 3GLY 4 0.1490
GLY 4THR 5 0.0458
THR 5VAL 6 0.0361
VAL 6CYS 7 0.0158
CYS 7SER 8 -0.0649
SER 8ASN 9 -0.0968
ASN 9CYS 10 -0.1453
CYS 10GLN 11 0.1138
GLN 11THR 12 -0.1278
THR 12SER 13 0.2188
SER 13THR 14 -0.1353
THR 14THR 15 0.0195
THR 15THR 16 -0.0409
THR 16LEU 17 0.0115
LEU 17TRP 18 0.2234
TRP 18ARG 19 -0.2565
ARG 19ARG 20 0.0574
ARG 20SER 21 -0.0593
SER 21PRO 22 -0.0718
PRO 22MET 23 0.0795
MET 23GLY 24 0.2826
GLY 24ASP 25 -0.1300
ASP 25PRO 26 -0.0428
PRO 26VAL 27 -0.0610
VAL 27CYS 28 -0.1023
CYS 28ASN 29 0.0693
ASN 29ALA 30 -0.0342
ALA 30CYS 31 -0.0553
CYS 31GLY 32 0.0687
GLY 32LEU 33 -0.0391
LEU 33TYR 34 -0.0715
TYR 34TYR 35 -0.0331
TYR 35LYS 36 0.0640
LYS 36LEU 37 0.0565
LEU 37HIS 38 -0.0291
HIS 38GLN 39 0.0586
GLN 39VAL 40 0.0328
VAL 40ASN 41 0.0217
ASN 41ARG 42 0.0489
ARG 42PRO 43 0.0059
PRO 43LEU 44 0.1113
LEU 44THR 45 -0.0593
THR 45MET 46 -0.1406
MET 46ARG 47 -0.0271
ARG 47LYS 48 0.0068
LYS 48ASP 49 0.0052
ASP 49GLY 50 -0.0776
GLY 50ILE 51 0.0073
ILE 51GLN 52 0.0055
GLN 52THR 53 -0.0393
THR 53ARG 54 -0.0642
ARG 54ASN 55 -0.0205
ASN 55ARG 56 0.0056
ARG 56LYS 57 -0.0200
LYS 57VAL 58 0.0106
VAL 58SER 59 0.0102
SER 59SER 60 -0.0678

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.