This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
ARG 2
0.0215
ARG 2
ALA 3
-0.0962
ALA 3
GLY 4
0.1490
GLY 4
THR 5
0.0458
THR 5
VAL 6
0.0361
VAL 6
CYS 7
0.0158
CYS 7
SER 8
-0.0649
SER 8
ASN 9
-0.0968
ASN 9
CYS 10
-0.1453
CYS 10
GLN 11
0.1138
GLN 11
THR 12
-0.1278
THR 12
SER 13
0.2188
SER 13
THR 14
-0.1353
THR 14
THR 15
0.0195
THR 15
THR 16
-0.0409
THR 16
LEU 17
0.0115
LEU 17
TRP 18
0.2234
TRP 18
ARG 19
-0.2565
ARG 19
ARG 20
0.0574
ARG 20
SER 21
-0.0593
SER 21
PRO 22
-0.0718
PRO 22
MET 23
0.0795
MET 23
GLY 24
0.2826
GLY 24
ASP 25
-0.1300
ASP 25
PRO 26
-0.0428
PRO 26
VAL 27
-0.0610
VAL 27
CYS 28
-0.1023
CYS 28
ASN 29
0.0693
ASN 29
ALA 30
-0.0342
ALA 30
CYS 31
-0.0553
CYS 31
GLY 32
0.0687
GLY 32
LEU 33
-0.0391
LEU 33
TYR 34
-0.0715
TYR 34
TYR 35
-0.0331
TYR 35
LYS 36
0.0640
LYS 36
LEU 37
0.0565
LEU 37
HIS 38
-0.0291
HIS 38
GLN 39
0.0586
GLN 39
VAL 40
0.0328
VAL 40
ASN 41
0.0217
ASN 41
ARG 42
0.0489
ARG 42
PRO 43
0.0059
PRO 43
LEU 44
0.1113
LEU 44
THR 45
-0.0593
THR 45
MET 46
-0.1406
MET 46
ARG 47
-0.0271
ARG 47
LYS 48
0.0068
LYS 48
ASP 49
0.0052
ASP 49
GLY 50
-0.0776
GLY 50
ILE 51
0.0073
ILE 51
GLN 52
0.0055
GLN 52
THR 53
-0.0393
THR 53
ARG 54
-0.0642
ARG 54
ASN 55
-0.0205
ASN 55
ARG 56
0.0056
ARG 56
LYS 57
-0.0200
LYS 57
VAL 58
0.0106
VAL 58
SER 59
0.0102
SER 59
SER 60
-0.0678
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.