This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
ARG 2
-0.0317
ARG 2
ALA 3
-0.0898
ALA 3
GLY 4
0.0873
GLY 4
THR 5
-0.0895
THR 5
VAL 6
0.1283
VAL 6
CYS 7
0.0615
CYS 7
SER 8
-0.0425
SER 8
ASN 9
0.1014
ASN 9
CYS 10
0.0105
CYS 10
GLN 11
0.0284
GLN 11
THR 12
-0.0168
THR 12
SER 13
-0.1098
SER 13
THR 14
-0.0668
THR 14
THR 15
0.0495
THR 15
THR 16
-0.0479
THR 16
LEU 17
0.0202
LEU 17
TRP 18
-0.1044
TRP 18
ARG 19
-0.0520
ARG 19
ARG 20
0.0212
ARG 20
SER 21
0.0053
SER 21
PRO 22
-0.0086
PRO 22
MET 23
-0.0024
MET 23
GLY 24
-0.0285
GLY 24
ASP 25
0.0239
ASP 25
PRO 26
-0.0235
PRO 26
VAL 27
0.0558
VAL 27
CYS 28
0.0072
CYS 28
ASN 29
0.0019
ASN 29
ALA 30
-0.0156
ALA 30
CYS 31
0.0317
CYS 31
GLY 32
-0.0174
GLY 32
LEU 33
0.0499
LEU 33
TYR 34
-0.0112
TYR 34
TYR 35
0.0065
TYR 35
LYS 36
-0.0025
LYS 36
LEU 37
0.0269
LEU 37
HIS 38
-0.0063
HIS 38
GLN 39
0.0156
GLN 39
VAL 40
-0.0104
VAL 40
ASN 41
0.0216
ASN 41
ARG 42
-0.0030
ARG 42
PRO 43
-0.0050
PRO 43
LEU 44
-0.0089
LEU 44
THR 45
0.0128
THR 45
MET 46
0.0145
MET 46
ARG 47
-0.0491
ARG 47
LYS 48
0.0098
LYS 48
ASP 49
-0.0150
ASP 49
GLY 50
0.0102
GLY 50
ILE 51
0.0458
ILE 51
GLN 52
-0.0406
GLN 52
THR 53
0.0306
THR 53
ARG 54
-0.0382
ARG 54
ASN 55
-0.0037
ASN 55
ARG 56
-0.0045
ARG 56
LYS 57
0.0108
LYS 57
VAL 58
-0.0052
VAL 58
SER 59
-0.0014
SER 59
SER 60
0.0061
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.