This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
ARG 2
0.0794
ARG 2
ALA 3
-0.2180
ALA 3
GLY 4
0.2451
GLY 4
THR 5
-0.0740
THR 5
VAL 6
0.0422
VAL 6
CYS 7
0.0533
CYS 7
SER 8
0.0211
SER 8
ASN 9
0.0994
ASN 9
CYS 10
0.0064
CYS 10
GLN 11
0.0739
GLN 11
THR 12
-0.0438
THR 12
SER 13
0.2259
SER 13
THR 14
0.0194
THR 14
THR 15
-0.0772
THR 15
THR 16
-0.1277
THR 16
LEU 17
0.0911
LEU 17
TRP 18
-0.2350
TRP 18
ARG 19
-0.1489
ARG 19
ARG 20
-0.0255
ARG 20
SER 21
-0.0817
SER 21
PRO 22
0.0405
PRO 22
MET 23
-0.0114
MET 23
GLY 24
0.0555
GLY 24
ASP 25
-0.0199
ASP 25
PRO 26
0.0952
PRO 26
VAL 27
0.0096
VAL 27
CYS 28
0.0436
CYS 28
ASN 29
-0.0546
ASN 29
ALA 30
-0.0246
ALA 30
CYS 31
0.0309
CYS 31
GLY 32
0.0065
GLY 32
LEU 33
-0.0244
LEU 33
TYR 34
0.0512
TYR 34
TYR 35
-0.0095
TYR 35
LYS 36
-0.0420
LYS 36
LEU 37
0.0405
LEU 37
HIS 38
-0.0363
HIS 38
GLN 39
0.0468
GLN 39
VAL 40
-0.0302
VAL 40
ASN 41
0.0171
ASN 41
ARG 42
0.0357
ARG 42
PRO 43
-0.0179
PRO 43
LEU 44
0.0256
LEU 44
THR 45
-0.0171
THR 45
MET 46
0.1090
MET 46
ARG 47
-0.0250
ARG 47
LYS 48
-0.0799
LYS 48
ASP 49
-0.0684
ASP 49
GLY 50
0.0404
GLY 50
ILE 51
-0.0839
ILE 51
GLN 52
0.1637
GLN 52
THR 53
0.1209
THR 53
ARG 54
0.1699
ARG 54
ASN 55
0.2376
ASN 55
ARG 56
-0.1010
ARG 56
LYS 57
-0.0070
LYS 57
VAL 58
-0.0109
VAL 58
SER 59
-0.0457
SER 59
SER 60
0.0838
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.