CNRS Nantes University US2B US2B
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***  TRANSCRIPTION/DNA 28-JUN-93 1GAT  ***

CA strain for 2401041811253864911

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ARG 2 0.0794
ARG 2ALA 3 -0.2180
ALA 3GLY 4 0.2451
GLY 4THR 5 -0.0740
THR 5VAL 6 0.0422
VAL 6CYS 7 0.0533
CYS 7SER 8 0.0211
SER 8ASN 9 0.0994
ASN 9CYS 10 0.0064
CYS 10GLN 11 0.0739
GLN 11THR 12 -0.0438
THR 12SER 13 0.2259
SER 13THR 14 0.0194
THR 14THR 15 -0.0772
THR 15THR 16 -0.1277
THR 16LEU 17 0.0911
LEU 17TRP 18 -0.2350
TRP 18ARG 19 -0.1489
ARG 19ARG 20 -0.0255
ARG 20SER 21 -0.0817
SER 21PRO 22 0.0405
PRO 22MET 23 -0.0114
MET 23GLY 24 0.0555
GLY 24ASP 25 -0.0199
ASP 25PRO 26 0.0952
PRO 26VAL 27 0.0096
VAL 27CYS 28 0.0436
CYS 28ASN 29 -0.0546
ASN 29ALA 30 -0.0246
ALA 30CYS 31 0.0309
CYS 31GLY 32 0.0065
GLY 32LEU 33 -0.0244
LEU 33TYR 34 0.0512
TYR 34TYR 35 -0.0095
TYR 35LYS 36 -0.0420
LYS 36LEU 37 0.0405
LEU 37HIS 38 -0.0363
HIS 38GLN 39 0.0468
GLN 39VAL 40 -0.0302
VAL 40ASN 41 0.0171
ASN 41ARG 42 0.0357
ARG 42PRO 43 -0.0179
PRO 43LEU 44 0.0256
LEU 44THR 45 -0.0171
THR 45MET 46 0.1090
MET 46ARG 47 -0.0250
ARG 47LYS 48 -0.0799
LYS 48ASP 49 -0.0684
ASP 49GLY 50 0.0404
GLY 50ILE 51 -0.0839
ILE 51GLN 52 0.1637
GLN 52THR 53 0.1209
THR 53ARG 54 0.1699
ARG 54ASN 55 0.2376
ASN 55ARG 56 -0.1010
ARG 56LYS 57 -0.0070
LYS 57VAL 58 -0.0109
VAL 58SER 59 -0.0457
SER 59SER 60 0.0838

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.