This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
ARG 2
-0.1031
ARG 2
ALA 3
0.1444
ALA 3
GLY 4
-0.2709
GLY 4
THR 5
0.0675
THR 5
VAL 6
-0.2002
VAL 6
CYS 7
-0.1274
CYS 7
SER 8
0.1163
SER 8
ASN 9
-0.2090
ASN 9
CYS 10
0.0379
CYS 10
GLN 11
-0.1697
GLN 11
THR 12
0.1734
THR 12
SER 13
-0.3375
SER 13
THR 14
0.3001
THR 14
THR 15
-0.1346
THR 15
THR 16
0.2425
THR 16
LEU 17
-0.1306
LEU 17
TRP 18
0.3239
TRP 18
ARG 19
0.0311
ARG 19
ARG 20
-0.0253
ARG 20
SER 21
-0.0395
SER 21
PRO 22
0.1394
PRO 22
MET 23
0.0224
MET 23
GLY 24
0.3432
GLY 24
ASP 25
-0.1090
ASP 25
PRO 26
0.1691
PRO 26
VAL 27
-0.0834
VAL 27
CYS 28
-0.0287
CYS 28
ASN 29
-0.0451
ASN 29
ALA 30
0.0442
ALA 30
CYS 31
-0.0401
CYS 31
GLY 32
0.0453
GLY 32
LEU 33
-0.2088
LEU 33
TYR 34
0.0665
TYR 34
TYR 35
-0.0279
TYR 35
LYS 36
-0.0650
LYS 36
LEU 37
-0.0181
LEU 37
HIS 38
-0.0013
HIS 38
GLN 39
-0.0361
GLN 39
VAL 40
0.0218
VAL 40
ASN 41
-0.0646
ASN 41
ARG 42
-0.0063
ARG 42
PRO 43
0.0350
PRO 43
LEU 44
-0.0457
LEU 44
THR 45
-0.0186
THR 45
MET 46
-0.0173
MET 46
ARG 47
0.0044
ARG 47
LYS 48
0.0295
LYS 48
ASP 49
0.0336
ASP 49
GLY 50
0.0656
GLY 50
ILE 51
-0.0725
ILE 51
GLN 52
0.0261
GLN 52
THR 53
0.0465
THR 53
ARG 54
0.1460
ARG 54
ASN 55
0.0925
ASN 55
ARG 56
-0.0682
ARG 56
LYS 57
0.0053
LYS 57
VAL 58
0.0311
VAL 58
SER 59
-0.0228
SER 59
SER 60
-0.0204
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.