CNRS Nantes University US2B US2B
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***  TRANSCRIPTION/DNA 28-JUN-93 1GAT  ***

CA strain for 2401041811253864911

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1ARG 2 -0.1031
ARG 2ALA 3 0.1444
ALA 3GLY 4 -0.2709
GLY 4THR 5 0.0675
THR 5VAL 6 -0.2002
VAL 6CYS 7 -0.1274
CYS 7SER 8 0.1163
SER 8ASN 9 -0.2090
ASN 9CYS 10 0.0379
CYS 10GLN 11 -0.1697
GLN 11THR 12 0.1734
THR 12SER 13 -0.3375
SER 13THR 14 0.3001
THR 14THR 15 -0.1346
THR 15THR 16 0.2425
THR 16LEU 17 -0.1306
LEU 17TRP 18 0.3239
TRP 18ARG 19 0.0311
ARG 19ARG 20 -0.0253
ARG 20SER 21 -0.0395
SER 21PRO 22 0.1394
PRO 22MET 23 0.0224
MET 23GLY 24 0.3432
GLY 24ASP 25 -0.1090
ASP 25PRO 26 0.1691
PRO 26VAL 27 -0.0834
VAL 27CYS 28 -0.0287
CYS 28ASN 29 -0.0451
ASN 29ALA 30 0.0442
ALA 30CYS 31 -0.0401
CYS 31GLY 32 0.0453
GLY 32LEU 33 -0.2088
LEU 33TYR 34 0.0665
TYR 34TYR 35 -0.0279
TYR 35LYS 36 -0.0650
LYS 36LEU 37 -0.0181
LEU 37HIS 38 -0.0013
HIS 38GLN 39 -0.0361
GLN 39VAL 40 0.0218
VAL 40ASN 41 -0.0646
ASN 41ARG 42 -0.0063
ARG 42PRO 43 0.0350
PRO 43LEU 44 -0.0457
LEU 44THR 45 -0.0186
THR 45MET 46 -0.0173
MET 46ARG 47 0.0044
ARG 47LYS 48 0.0295
LYS 48ASP 49 0.0336
ASP 49GLY 50 0.0656
GLY 50ILE 51 -0.0725
ILE 51GLN 52 0.0261
GLN 52THR 53 0.0465
THR 53ARG 54 0.1460
ARG 54ASN 55 0.0925
ASN 55ARG 56 -0.0682
ARG 56LYS 57 0.0053
LYS 57VAL 58 0.0311
VAL 58SER 59 -0.0228
SER 59SER 60 -0.0204

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.