This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
-0.0745
VAL 2
PHE 3
0.0567
PHE 3
GLY 4
-0.0059
GLY 4
ARG 5
0.0200
ARG 5
CYS 6
-0.0778
CYS 6
GLU 7
0.0209
GLU 7
LEU 8
-0.0437
LEU 8
ALA 9
0.0518
ALA 9
ALA 10
-0.0483
ALA 10
ALA 11
-0.1409
ALA 11
MET 12
0.0183
MET 12
LYS 13
0.0145
LYS 13
ARG 14
0.0257
ARG 14
HIS 15
-0.0832
HIS 15
GLY 16
0.1520
GLY 16
LEU 17
0.0090
LEU 17
ASP 18
-0.0053
ASP 18
ASN 19
0.0295
ASN 19
TYR 20
-0.0495
TYR 20
ARG 21
0.0276
ARG 21
GLY 22
-0.0275
GLY 22
TYR 23
-0.0235
TYR 23
SER 24
0.0059
SER 24
LEU 25
0.0317
LEU 25
GLY 26
-0.0034
GLY 26
ASN 27
0.0304
ASN 27
TRP 28
0.0091
TRP 28
VAL 29
0.0254
VAL 29
CYS 30
-0.0020
CYS 30
ALA 31
0.0021
ALA 31
ALA 32
-0.0298
ALA 32
LYS 33
0.0388
LYS 33
PHE 34
-0.0106
PHE 34
GLU 35
-0.0148
GLU 35
SER 36
-0.1452
SER 36
ASN 37
0.0801
ASN 37
PHE 38
-0.0067
PHE 38
ASN 39
0.0122
ASN 39
SER 40
-0.0719
SER 40
GLN 41
0.0737
GLN 41
ALA 42
0.0390
ALA 42
THR 43
0.1946
THR 43
ASN 44
0.2327
ASN 44
ARG 45
0.0141
ARG 45
ASN 46
0.0405
ASN 46
THR 47
-0.0812
THR 47
ASP 48
-0.0514
ASP 48
GLY 49
0.0283
GLY 49
SER 50
-0.0650
SER 50
THR 51
0.1306
THR 51
ASP 52
-0.1039
ASP 52
TYR 53
-0.0215
TYR 53
GLY 54
0.0634
GLY 54
ILE 55
0.0409
ILE 55
LEU 56
-0.0251
LEU 56
GLN 57
-0.1596
GLN 57
ILE 58
0.1667
ILE 58
ASN 59
-0.1218
ASN 59
SER 60
-0.0566
SER 60
ARG 61
0.0661
ARG 61
TRP 62
-0.1297
TRP 62
TRP 63
-0.0372
TRP 63
CYS 64
0.0020
CYS 64
ASN 65
-0.0075
ASN 65
ASP 66
0.0931
ASP 66
GLY 67
-0.0583
GLY 67
ARG 68
0.0875
ARG 68
THR 69
-0.0936
THR 69
PRO 70
0.0124
PRO 70
GLY 71
-0.0339
GLY 71
SER 72
-0.0080
SER 72
ARG 73
0.0122
ARG 73
ASN 74
-0.1218
ASN 74
LEU 75
0.0980
LEU 75
CYS 76
-0.2110
CYS 76
ASN 77
0.1445
ASN 77
ILE 78
-0.1011
ILE 78
PRO 79
0.0687
PRO 79
CYS 80
-0.0278
CYS 80
SER 81
-0.0141
SER 81
ALA 82
0.1645
ALA 82
LEU 83
-0.0681
LEU 83
LEU 84
-0.0546
LEU 84
SER 85
0.2198
SER 85
SER 86
-0.0895
SER 86
ASP 87
0.0154
ASP 87
ILE 88
-0.0141
ILE 88
THR 89
-0.0357
THR 89
ALA 90
-0.0354
ALA 90
SER 91
-0.0093
SER 91
VAL 92
0.0602
VAL 92
ASN 93
-0.0627
ASN 93
CYS 94
-0.1426
CYS 94
ALA 95
0.1085
ALA 95
LYS 96
-0.0309
LYS 96
LYS 97
-0.1188
LYS 97
ILE 98
0.0990
ILE 98
VAL 99
-0.1037
VAL 99
SER 100
0.0308
SER 100
ASP 101
-0.0796
ASP 101
GLY 102
-0.0158
GLY 102
ASN 103
0.0103
ASN 103
GLY 104
0.0304
GLY 104
MET 105
0.0255
MET 105
ASN 106
0.0112
ASN 106
ALA 107
0.0555
ALA 107
TRP 108
-0.0168
TRP 108
VAL 109
0.1267
VAL 109
ALA 110
0.0210
ALA 110
TRP 111
-0.0237
TRP 111
ARG 112
-0.0162
ARG 112
ASN 113
0.0510
ASN 113
ARG 114
0.0180
ARG 114
CYS 115
0.0127
CYS 115
LYS 116
-0.0024
LYS 116
GLY 117
-0.0203
GLY 117
THR 118
0.0088
THR 118
ASP 119
0.0396
ASP 119
VAL 120
-0.0254
VAL 120
GLN 121
0.0367
GLN 121
ALA 122
-0.0401
ALA 122
TRP 123
-0.0204
TRP 123
ILE 124
0.0668
ILE 124
ARG 125
-0.0975
ARG 125
GLY 126
0.1642
GLY 126
CYS 127
-0.1227
CYS 127
ARG 128
0.2854
ARG 128
LEU 129
0.2825
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.