This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 1
CYS 2
-0.0001
CYS 2
GLY 3
-0.0951
GLY 3
LEU 4
0.0001
LEU 4
VAL 5
-0.0223
VAL 5
ALA 6
0.0001
ALA 6
SER 7
-0.1213
SER 7
ASN 8
-0.0001
ASN 8
LEU 9
-0.0150
LEU 9
ASN 10
0.0001
ASN 10
LEU 11
0.0899
LEU 11
LYS 12
0.0002
LYS 12
PRO 13
0.0447
PRO 13
GLY 14
0.0001
GLY 14
GLU 15
-0.0350
GLU 15
LEU 17
0.0527
LEU 17
ARG 18
0.0004
ARG 18
VAL 19
0.0245
VAL 19
ARG 20
-0.0002
ARG 20
GLY 21
0.0534
GLY 21
GLU 22
-0.0000
GLU 22
VAL 23
-0.0262
VAL 23
ALA 24
-0.0001
ALA 24
PRO 25
-0.0130
PRO 25
ASP 26
-0.0002
ASP 26
ALA 27
-0.0149
ALA 27
LYS 28
-0.0001
LYS 28
SER 29
-0.0305
SER 29
PHE 30
0.0000
PHE 30
VAL 31
-0.0364
VAL 31
LEU 32
-0.0002
LEU 32
ASN 33
-0.0628
ASN 33
LEU 34
-0.0001
LEU 34
GLY 35
-0.0886
GLY 35
LYS 36
0.0001
LYS 36
ASP 37
-0.0074
ASP 37
SER 38
0.0005
SER 38
ASN 39
0.0610
ASN 39
ASN 40
-0.0004
ASN 40
LEU 41
-0.0378
LEU 41
CYS 42
-0.0000
CYS 42
LEU 43
-0.0362
LEU 43
HIS 44
-0.0001
HIS 44
PHE 45
-0.0364
PHE 45
ASN 46
0.0003
ASN 46
PRO 47
-0.0018
PRO 47
ARG 48
-0.0003
ARG 48
PHE 49
-0.0279
PHE 49
ASN 50
0.0002
ASN 50
ALA 51
-0.0245
ALA 51
HIS 52
0.0000
HIS 52
GLY 53
-0.0018
GLY 53
ASP 54
0.0004
ASP 54
ALA 55
-0.0257
ALA 55
ASN 56
-0.0003
ASN 56
THR 57
0.0128
THR 57
ILE 58
0.0000
ILE 58
VAL 59
-0.0204
VAL 59
CYS 60
0.0001
CYS 60
ASN 61
-0.0292
ASN 61
SER 62
-0.0002
SER 62
LYS 63
-0.0042
LYS 63
ASP 64
0.0002
ASP 64
GLY 65
-0.0192
GLY 65
GLY 66
0.0003
GLY 66
ALA 67
0.0220
ALA 67
TRP 68
-0.0000
TRP 68
GLY 69
0.0055
GLY 69
THR 70
-0.0000
THR 70
GLU 71
-0.0216
GLU 71
GLN 72
-0.0000
GLN 72
ARG 73
-0.0046
ARG 73
GLU 74
-0.0000
GLU 74
ALA 75
0.0104
ALA 75
VAL 76
0.0000
VAL 76
PHE 77
0.0028
PHE 77
PRO 78
0.0001
PRO 78
PHE 79
0.0230
PHE 79
GLN 80
0.0001
GLN 80
PRO 81
0.0268
PRO 81
GLY 82
-0.0001
GLY 82
SER 83
0.0421
SER 83
VAL 84
0.0002
VAL 84
ALA 85
0.0266
ALA 85
GLU 86
-0.0003
GLU 86
VAL 87
0.0130
VAL 87
CYS 88
0.0001
CYS 88
ILE 89
0.0256
ILE 89
THR 90
-0.0000
THR 90
PHE 91
0.0301
PHE 91
ASP 92
0.0000
ASP 92
GLN 93
-0.0253
GLN 93
ALA 94
0.0001
ALA 94
ASN 95
0.0362
ASN 95
LEU 96
0.0002
LEU 96
THR 97
0.0504
THR 97
VAL 98
-0.0004
VAL 98
LYS 99
0.0313
LYS 99
LEU 100
0.0001
LEU 100
PRO 101
0.0127
PRO 101
ASP 102
-0.0001
ASP 102
GLY 103
0.0246
GLY 103
TYR 104
0.0001
TYR 104
GLU 105
0.0392
GLU 105
PHE 106
0.0001
PHE 106
LYS 107
0.0394
LYS 107
PHE 108
0.0000
PHE 108
PRO 109
0.0151
PRO 109
ASN 110
0.0001
ASN 110
ARG 111
-0.0344
ARG 111
LEU 112
-0.0001
LEU 112
ASN 113
-0.0615
ASN 113
LEU 114
-0.0000
LEU 114
GLU 115
-0.0557
GLU 115
ALA 116
-0.0003
ALA 116
ILE 117
0.0405
ILE 117
ASN 118
0.0002
ASN 118
TYR 119
-0.0481
TYR 119
MET 120
-0.0002
MET 120
ALA 121
-0.0733
ALA 121
ALA 122
0.0002
ALA 122
ASP 123
-0.0566
ASP 123
GLY 124
0.0000
GLY 124
ASP 125
0.0042
ASP 125
PHE 126
-0.0000
PHE 126
LYS 127
0.0643
LYS 127
ILE 128
0.0002
ILE 128
LYS 129
-0.0444
LYS 129
CYS 130
0.0000
CYS 130
VAL 131
0.0361
VAL 131
ALA 132
0.0002
ALA 132
PHE 133
-0.0155
PHE 133
ASP 134
0.0002
ASP 134
ALA 1
0.0416
ALA 1
CYS 2
-0.0001
CYS 2
GLY 3
-0.0798
GLY 3
LEU 4
-0.0003
LEU 4
VAL 5
-0.0349
VAL 5
ALA 6
0.0000
ALA 6
SER 7
-0.0977
SER 7
ASN 8
0.0001
ASN 8
LEU 9
0.0170
LEU 9
ASN 10
-0.0001
ASN 10
LEU 11
0.1198
LEU 11
LYS 12
-0.0001
LYS 12
PRO 13
0.0402
PRO 13
GLY 14
0.0001
GLY 14
GLU 15
-0.0602
GLU 15
CYS 16
-0.0000
CYS 16
LEU 17
0.0359
LEU 17
ARG 18
0.0000
ARG 18
VAL 19
0.0401
VAL 19
ARG 20
-0.0002
ARG 20
GLY 21
0.0431
GLY 21
GLU 22
0.0004
GLU 22
VAL 23
-0.0703
VAL 23
ALA 24
-0.0001
ALA 24
PRO 25
-0.0229
PRO 25
ASP 26
-0.0004
ASP 26
ALA 27
-0.0061
ALA 27
LYS 28
0.0002
LYS 28
SER 29
-0.0190
SER 29
PHE 30
0.0001
PHE 30
VAL 31
-0.0246
VAL 31
LEU 32
0.0005
LEU 32
ASN 33
-0.0556
ASN 33
LEU 34
-0.0000
LEU 34
GLY 35
-0.0909
GLY 35
LYS 36
0.0005
LYS 36
ASP 37
-0.0084
ASP 37
SER 38
-0.0000
SER 38
ASN 39
0.0429
ASN 39
ASN 40
-0.0000
ASN 40
LEU 41
-0.0387
LEU 41
CYS 42
-0.0001
CYS 42
LEU 43
-0.0324
LEU 43
HIS 44
0.0002
HIS 44
PHE 45
-0.0332
PHE 45
ASN 46
0.0003
ASN 46
PRO 47
-0.0006
PRO 47
ARG 48
-0.0003
ARG 48
PHE 49
-0.0186
PHE 49
ASN 50
-0.0004
ASN 50
ALA 51
-0.0232
ALA 51
HIS 52
0.0000
HIS 52
GLY 53
0.0042
GLY 53
ASP 54
-0.0000
ASP 54
ALA 55
-0.0191
ALA 55
ASN 56
-0.0002
ASN 56
THR 57
0.0111
THR 57
ILE 58
0.0000
ILE 58
VAL 59
-0.0204
VAL 59
CYS 60
-0.0002
CYS 60
ASN 61
-0.0294
ASN 61
SER 62
-0.0001
SER 62
LYS 63
-0.0062
LYS 63
ASP 64
0.0003
ASP 64
GLY 65
-0.0237
GLY 65
GLY 66
0.0000
GLY 66
ALA 67
0.0227
ALA 67
TRP 68
-0.0001
TRP 68
GLY 69
0.0074
GLY 69
THR 70
-0.0003
THR 70
GLU 71
-0.0184
GLU 71
GLN 72
-0.0000
GLN 72
ARG 73
-0.0055
ARG 73
GLU 74
-0.0001
GLU 74
ALA 75
0.0110
ALA 75
VAL 76
-0.0002
VAL 76
PHE 77
0.0021
PHE 77
PRO 78
-0.0000
PRO 78
PHE 79
0.0111
PHE 79
GLN 80
0.0002
GLN 80
PRO 81
0.0273
PRO 81
GLY 82
-0.0003
GLY 82
SER 83
0.0608
SER 83
VAL 84
-0.0002
VAL 84
ALA 85
0.0057
ALA 85
GLU 86
-0.0000
GLU 86
VAL 87
0.0023
VAL 87
CYS 88
-0.0002
CYS 88
ILE 89
0.0236
ILE 89
THR 90
0.0005
THR 90
PHE 91
-0.0560
PHE 91
ASP 92
-0.0002
ASP 92
GLN 93
-0.0190
GLN 93
ALA 94
0.0000
ALA 94
ASN 95
0.0144
ASN 95
LEU 96
0.0002
LEU 96
THR 97
0.0439
THR 97
VAL 98
-0.0001
VAL 98
LYS 99
0.0298
LYS 99
LEU 100
-0.0001
LEU 100
PRO 101
0.0099
PRO 101
ASP 102
-0.0000
ASP 102
GLY 103
0.0178
GLY 103
TYR 104
0.0000
TYR 104
GLU 105
0.0343
GLU 105
PHE 106
0.0004
PHE 106
LYS 107
0.0379
LYS 107
PHE 108
0.0001
PHE 108
PRO 109
0.0108
PRO 109
ASN 110
0.0001
ASN 110
ARG 111
-0.0352
ARG 111
LEU 112
-0.0002
LEU 112
ASN 113
-0.0439
ASN 113
LEU 114
-0.0001
LEU 114
GLU 115
-0.0543
GLU 115
ALA 116
-0.0001
ALA 116
ILE 117
0.0359
ILE 117
ASN 118
0.0001
ASN 118
TYR 119
-0.0554
TYR 119
MET 120
-0.0001
MET 120
ALA 121
-0.0784
ALA 121
ALA 122
0.0001
ALA 122
ASP 123
-0.0382
ASP 123
GLY 124
0.0000
GLY 124
ASP 125
0.0058
ASP 125
PHE 126
-0.0003
PHE 126
LYS 127
0.0145
LYS 127
ILE 128
0.0002
ILE 128
LYS 129
-0.0352
LYS 129
CYS 130
-0.0002
CYS 130
VAL 131
0.0231
VAL 131
ALA 132
-0.0001
ALA 132
PHE 133
-0.0199
PHE 133
ASP 134
0.0003
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.