This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
CYS 10
PRO 11
0.1016
PRO 11
LEU 12
0.0135
LEU 12
MET 13
0.0012
MET 13
VAL 14
0.0271
VAL 14
LYS 15
-0.0339
LYS 15
VAL 16
0.0413
VAL 16
LEU 17
-0.0044
LEU 17
ASP 18
-0.0216
ASP 18
ALA 19
-0.0371
ALA 19
VAL 20
0.0103
VAL 20
ARG 21
0.0311
ARG 21
GLY 22
-0.0377
GLY 22
SER 23
-0.0682
SER 23
PRO 24
-0.0533
PRO 24
ALA 25
-0.0233
ALA 25
ILE 26
-0.0207
ILE 26
ASN 27
-0.0850
ASN 27
VAL 28
-0.0724
VAL 28
ALA 29
-0.2288
ALA 29
VAL 30
0.0513
VAL 30
HIS 31
-0.2418
HIS 31
VAL 32
0.0015
VAL 32
PHE 33
-0.1417
PHE 33
ARG 34
0.0107
ARG 34
LYS 35
-0.1150
LYS 35
ALA 36
0.0482
ALA 36
ALA 37
-0.0581
ALA 37
ASP 38
-0.0351
ASP 38
ASP 39
0.0673
ASP 39
THR 40
-0.0645
THR 40
TRP 41
-0.0435
TRP 41
GLU 42
0.1208
GLU 42
PRO 43
-0.2711
PRO 43
PHE 44
0.0788
PHE 44
ALA 45
-0.2338
ALA 45
SER 46
-0.0731
SER 46
GLY 47
-0.3834
GLY 47
LYS 48
-0.3200
LYS 48
THR 49
-0.1937
THR 49
SER 50
-0.0967
SER 50
GLU 51
-0.0848
GLU 51
SER 52
0.0765
SER 52
GLY 53
0.0063
GLY 53
GLU 54
0.0162
GLU 54
LEU 55
-0.2263
LEU 55
HIS 56
0.0618
HIS 56
GLY 57
-0.1723
GLY 57
LEU 58
-0.1001
LEU 58
THR 59
0.1518
THR 59
THR 60
0.0833
THR 60
GLU 61
0.0856
GLU 61
GLU 62
-0.0741
GLU 62
GLU 63
0.0128
GLU 63
PHE 64
0.0014
PHE 64
VAL 65
-0.0154
VAL 65
GLU 66
-0.0453
GLU 66
GLY 67
-0.0285
GLY 67
ILE 68
-0.0777
ILE 68
TYR 69
-0.0375
TYR 69
LYS 70
-0.1631
LYS 70
VAL 71
0.1397
VAL 71
GLU 72
-0.0823
GLU 72
ILE 73
0.0278
ILE 73
ASP 74
-0.0312
ASP 74
THR 75
0.0689
THR 75
LYS 76
-0.0047
LYS 76
SER 77
0.0378
SER 77
TYR 78
-0.0112
TYR 78
TRP 79
0.0840
TRP 79
LYS 80
-0.0189
LYS 80
ALA 81
0.0232
ALA 81
LEU 82
-0.0178
LEU 82
GLY 83
0.0725
GLY 83
ILE 84
-0.0401
ILE 84
SER 85
0.0106
SER 85
PRO 86
-0.0241
PRO 86
PHE 87
0.0198
PHE 87
HIS 88
0.0018
HIS 88
GLU 89
0.0464
GLU 89
HIS 90
-0.0331
HIS 90
ALA 91
-0.1019
ALA 91
GLU 92
-0.0009
GLU 92
VAL 93
-0.3396
VAL 93
VAL 94
0.3414
VAL 94
PHE 95
-0.2049
PHE 95
THR 96
-0.2413
THR 96
ALA 97
0.0233
ALA 97
ASN 98
-0.1261
ASN 98
ASP 99
0.0803
ASP 99
SER 100
-0.0384
SER 100
GLY 101
0.0322
GLY 101
PRO 102
0.0628
PRO 102
ARG 103
-0.0315
ARG 103
ARG 104
0.1332
ARG 104
TYR 105
-0.0239
TYR 105
THR 106
0.1338
THR 106
ILE 107
-0.0191
ILE 107
ALA 108
0.0937
ALA 108
ALA 109
-0.1266
ALA 109
LEU 110
-0.0345
LEU 110
LEU 111
-0.0257
LEU 111
SER 112
-0.0276
SER 112
PRO 113
-0.0479
PRO 113
TYR 114
0.0405
TYR 114
SER 115
-0.1822
SER 115
TYR 116
-0.0949
TYR 116
SER 117
-0.1593
SER 117
THR 118
-0.0014
THR 118
MET 119
-0.2539
MET 119
ALA 120
-0.1646
ALA 120
VAL 121
-0.1135
VAL 121
VAL 122
-0.0066
VAL 122
THR 123
-0.0454
THR 123
ASN 124
-0.1154
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.