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***  PLANT PROTEIN 30-APR-81 1CRN  ***

CA strain for 221109122551125182

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
THR 1THR 2 0.4287
THR 2CYS 3 0.4060
CYS 3CYS 4 -0.2988
CYS 4PRO 5 0.1348
PRO 5SER 6 0.0635
SER 6ILE 7 0.1148
ILE 7VAL 8 -0.1445
VAL 8ALA 9 0.2139
ALA 9ARG 10 0.0414
ARG 10SER 11 -0.1360
SER 11ASN 12 0.2022
ASN 12PHE 13 0.1035
PHE 13ASN 14 0.0003
ASN 14VAL 15 0.0858
VAL 15CYS 16 0.2197
CYS 16ARG 17 -0.1197
ARG 17LEU 18 0.1338
LEU 18PRO 19 0.0727
PRO 19GLY 20 0.1742
GLY 20THR 21 -0.1737
THR 21PRO 22 0.1614
PRO 22GLU 23 0.3233
GLU 23ALA 24 -0.1213
ALA 24ILE 25 0.1564
ILE 25CYS 26 0.0340
CYS 26ALA 27 -0.0801
ALA 27THR 28 0.0919
THR 28TYR 29 0.0573
TYR 29THR 30 -0.0735
THR 30GLY 31 -0.1912
GLY 31CYS 32 0.1709
CYS 32ILE 33 0.0267
ILE 33ILE 34 0.0693
ILE 34ILE 35 0.3089
ILE 35PRO 36 -0.0931
PRO 36GLY 37 -0.0058
GLY 37ALA 38 0.0289
ALA 38THR 39 -0.0499
THR 39CYS 40 -0.0978
CYS 40PRO 41 0.2465
PRO 41GLY 42 -0.1058
GLY 42ASP 43 -0.1567
ASP 43TYR 44 0.0298
TYR 44ALA 45 0.0554
ALA 45ASN 46 0.0052

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.