This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
0.0005
ASP 2
VAL 3
0.0001
VAL 3
PHE 4
0.0003
PHE 4
MET 5
0.0000
MET 5
LYS 6
-0.0000
LYS 6
GLY 7
-0.0004
GLY 7
LEU 8
-0.0001
LEU 8
SER 9
-0.0002
SER 9
LYS 10
-0.0001
LYS 10
ALA 11
-0.0001
ALA 11
LYS 12
-0.0000
LYS 12
GLU 13
-0.0001
GLU 13
GLY 14
-0.0002
GLY 14
VAL 15
0.0002
VAL 15
VAL 16
0.0001
VAL 16
ALA 17
0.0004
ALA 17
ALA 18
0.0003
ALA 18
ALA 19
0.0001
ALA 19
GLU 20
-0.0001
GLU 20
LYS 21
0.0001
LYS 21
THR 22
0.0003
THR 22
LYS 23
-0.0000
LYS 23
GLN 24
0.0002
GLN 24
GLY 25
0.0000
GLY 25
VAL 26
-0.0005
VAL 26
ALA 27
-0.0003
ALA 27
GLU 28
0.0000
GLU 28
ALA 29
0.0003
ALA 29
ALA 30
-0.0002
ALA 30
GLY 31
-0.0002
GLY 31
LYS 32
0.0002
LYS 32
THR 33
-0.0003
THR 33
LYS 34
-0.0006
LYS 34
GLU 35
0.0002
GLU 35
GLY 36
0.0006
GLY 36
VAL 37
-0.0009
VAL 37
LEU 38
0.0000
LEU 38
TYR 39
0.0008
TYR 39
VAL 40
-0.0002
VAL 40
GLY 41
-0.0002
GLY 41
SER 42
-0.0003
SER 42
LYS 43
0.0005
LYS 43
THR 44
-0.0001
THR 44
LYS 45
-0.0000
LYS 45
GLU 46
-0.0001
GLU 46
GLY 47
0.0011
GLY 47
VAL 48
-0.0009
VAL 48
VAL 49
-0.0002
VAL 49
HIS 50
0.0005
HIS 50
GLY 51
0.0008
GLY 51
VAL 52
-0.0005
VAL 52
ALA 53
-0.0002
ALA 53
THR 54
0.0004
THR 54
VAL 55
-0.0002
VAL 55
ALA 56
-0.0003
ALA 56
GLU 57
-0.0001
GLU 57
LYS 58
0.0008
LYS 58
THR 59
-0.0005
THR 59
LYS 60
-0.0001
LYS 60
GLU 61
0.0006
GLU 61
GLN 62
0.0005
GLN 62
VAL 63
-0.0004
VAL 63
THR 64
-0.0001
THR 64
ASN 65
0.0003
ASN 65
VAL 66
0.0003
VAL 66
GLY 67
0.0003
GLY 67
GLY 68
0.0003
GLY 68
ALA 69
0.0018
ALA 69
VAL 70
0.0004
VAL 70
VAL 71
-0.0002
VAL 71
THR 72
0.0006
THR 72
GLY 73
0.0012
GLY 73
VAL 74
-0.0006
VAL 74
THR 75
0.0006
THR 75
ALA 76
0.0010
ALA 76
VAL 77
0.0003
VAL 77
ALA 78
-0.0004
ALA 78
GLN 79
0.0007
GLN 79
LYS 80
0.0003
LYS 80
THR 81
0.0002
THR 81
VAL 82
-0.0003
VAL 82
GLU 83
0.0002
GLU 83
GLY 84
0.0021
GLY 84
ALA 85
0.0007
ALA 85
GLY 86
0.0007
GLY 86
SER 87
0.0023
SER 87
ILE 88
-0.0000
ILE 88
ALA 89
0.0008
ALA 89
ALA 90
0.0003
ALA 90
ALA 91
-0.0001
ALA 91
THR 92
0.0019
THR 92
GLY 93
-0.0040
GLY 93
PHE 94
0.0002
PHE 94
VAL 95
0.0009
VAL 95
LYS 96
-0.0016
LYS 96
LYS 97
0.0004
LYS 97
ASP 98
0.0004
ASP 98
GLN 99
0.0006
GLN 99
LEU 100
0.0008
LEU 100
GLY 101
-0.0009
GLY 101
LYS 102
0.0028
LYS 102
ASN 103
-0.0028
ASN 103
GLU 104
-0.0012
GLU 104
GLU 105
-0.0026
GLU 105
GLY 106
-0.0023
GLY 106
ALA 107
-0.0014
ALA 107
PRO 108
0.0005
PRO 108
GLN 109
-0.0007
GLN 109
GLU 110
-0.0002
GLU 110
GLY 111
0.0011
GLY 111
ILE 112
0.0001
ILE 112
LEU 113
0.0003
LEU 113
GLU 114
-0.0009
GLU 114
ASP 115
0.0002
ASP 115
MET 116
-0.0006
MET 116
PRO 117
0.0001
PRO 117
VAL 118
-0.0002
VAL 118
ASP 119
0.0008
ASP 119
PRO 120
0.0001
PRO 120
ASP 121
-0.0002
ASP 121
ASN 122
-0.0010
ASN 122
GLU 123
-0.0001
GLU 123
ALA 124
-0.0000
ALA 124
TYR 125
-0.0008
TYR 125
GLU 126
0.0015
GLU 126
MET 127
-0.0015
MET 127
PRO 128
0.0009
PRO 128
SER 129
-0.0016
SER 129
GLU 130
-0.0004
GLU 130
GLU 131
0.0001
GLU 131
GLY 132
-0.0001
GLY 132
TYR 133
0.0003
TYR 133
GLN 134
0.0002
GLN 134
ASP 135
0.0002
ASP 135
TYR 136
-0.0003
TYR 136
GLU 137
0.0006
GLU 137
PRO 138
-0.0001
PRO 138
GLU 139
-0.0015
GLU 139
ALA 140
0.0005
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.