This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
0.0002
ASP 2
VAL 3
-0.0001
VAL 3
PHE 4
-0.0002
PHE 4
MET 5
0.0001
MET 5
LYS 6
-0.0002
LYS 6
GLY 7
0.0000
GLY 7
LEU 8
0.0001
LEU 8
SER 9
0.0002
SER 9
LYS 10
0.0000
LYS 10
ALA 11
-0.0002
ALA 11
LYS 12
0.0000
LYS 12
GLU 13
-0.0003
GLU 13
GLY 14
0.0000
GLY 14
VAL 15
-0.0001
VAL 15
VAL 16
-0.0002
VAL 16
ALA 17
0.0004
ALA 17
ALA 18
-0.0000
ALA 18
ALA 19
-0.0005
ALA 19
GLU 20
-0.0001
GLU 20
LYS 21
0.0001
LYS 21
THR 22
-0.0002
THR 22
LYS 23
-0.0002
LYS 23
GLN 24
0.0002
GLN 24
GLY 25
0.0002
GLY 25
VAL 26
-0.0000
VAL 26
ALA 27
0.0001
ALA 27
GLU 28
-0.0000
GLU 28
ALA 29
-0.0001
ALA 29
ALA 30
0.0000
ALA 30
GLY 31
-0.0001
GLY 31
LYS 32
-0.0001
LYS 32
THR 33
0.0001
THR 33
LYS 34
-0.0001
LYS 34
GLU 35
0.0002
GLU 35
GLY 36
0.0000
GLY 36
VAL 37
-0.0001
VAL 37
LEU 38
0.0001
LEU 38
TYR 39
-0.0002
TYR 39
VAL 40
0.0001
VAL 40
GLY 41
-0.0001
GLY 41
SER 42
0.0003
SER 42
LYS 43
-0.0002
LYS 43
THR 44
0.0004
THR 44
LYS 45
0.0000
LYS 45
GLU 46
0.0002
GLU 46
GLY 47
-0.0004
GLY 47
VAL 48
0.0000
VAL 48
VAL 49
0.0000
VAL 49
HIS 50
0.0002
HIS 50
GLY 51
0.0000
GLY 51
VAL 52
-0.0000
VAL 52
ALA 53
0.0001
ALA 53
THR 54
-0.0000
THR 54
VAL 55
-0.0000
VAL 55
ALA 56
-0.0003
ALA 56
GLU 57
-0.0002
GLU 57
LYS 58
-0.0001
LYS 58
THR 59
-0.0002
THR 59
LYS 60
0.0003
LYS 60
GLU 61
-0.0002
GLU 61
GLN 62
-0.0001
GLN 62
VAL 63
0.0001
VAL 63
THR 64
0.0002
THR 64
ASN 65
-0.0002
ASN 65
VAL 66
0.0004
VAL 66
GLY 67
0.0001
GLY 67
GLY 68
0.0000
GLY 68
ALA 69
-0.0004
ALA 69
VAL 70
-0.0001
VAL 70
VAL 71
-0.0001
VAL 71
THR 72
-0.0004
THR 72
GLY 73
-0.0002
GLY 73
VAL 74
-0.0001
VAL 74
THR 75
0.0001
THR 75
ALA 76
-0.0005
ALA 76
VAL 77
-0.0003
VAL 77
ALA 78
0.0002
ALA 78
GLN 79
-0.0000
GLN 79
LYS 80
0.0001
LYS 80
THR 81
0.0000
THR 81
VAL 82
0.0001
VAL 82
GLU 83
0.0001
GLU 83
GLY 84
0.0000
GLY 84
ALA 85
-0.0000
ALA 85
GLY 86
-0.0001
GLY 86
SER 87
-0.0001
SER 87
ILE 88
0.0002
ILE 88
ALA 89
-0.0005
ALA 89
ALA 90
-0.0001
ALA 90
ALA 91
0.0000
ALA 91
THR 92
-0.0002
THR 92
GLY 93
-0.0001
GLY 93
PHE 94
-0.0001
PHE 94
VAL 95
-0.0004
VAL 95
LYS 96
0.0003
LYS 96
LYS 97
0.0002
LYS 97
ASP 98
-0.0002
ASP 98
GLN 99
-0.0001
GLN 99
LEU 100
-0.0007
LEU 100
GLY 101
0.0003
GLY 101
LYS 102
-0.0005
LYS 102
ASN 103
-0.0006
ASN 103
GLU 104
-0.0001
GLU 104
GLU 105
-0.0004
GLU 105
GLY 106
0.0007
GLY 106
ALA 107
0.0025
ALA 107
PRO 108
-0.0002
PRO 108
GLN 109
-0.0002
GLN 109
GLU 110
0.0004
GLU 110
GLY 111
0.0001
GLY 111
ILE 112
0.0001
ILE 112
LEU 113
0.0004
LEU 113
GLU 114
0.0000
GLU 114
ASP 115
0.0007
ASP 115
MET 116
-0.0004
MET 116
PRO 117
0.0003
PRO 117
VAL 118
-0.0002
VAL 118
ASP 119
-0.0000
ASP 119
PRO 120
0.0001
PRO 120
ASP 121
-0.0003
ASP 121
ASN 122
-0.0003
ASN 122
GLU 123
-0.0001
GLU 123
ALA 124
0.0001
ALA 124
TYR 125
0.0003
TYR 125
GLU 126
0.0003
GLU 126
MET 127
-0.0002
MET 127
PRO 128
-0.0000
PRO 128
SER 129
-0.0003
SER 129
GLU 130
-0.0001
GLU 130
GLU 131
-0.0002
GLU 131
GLY 132
0.0001
GLY 132
TYR 133
0.0001
TYR 133
GLN 134
-0.0001
GLN 134
ASP 135
-0.0003
ASP 135
TYR 136
-0.0002
TYR 136
GLU 137
-0.0002
GLU 137
PRO 138
-0.0003
PRO 138
GLU 139
-0.0002
GLU 139
ALA 140
0.0004
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.