This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
-0.0002
ASP 2
VAL 3
-0.0000
VAL 3
PHE 4
-0.0000
PHE 4
MET 5
0.0000
MET 5
LYS 6
0.0000
LYS 6
GLY 7
-0.0002
GLY 7
LEU 8
0.0001
LEU 8
SER 9
0.0004
SER 9
LYS 10
-0.0001
LYS 10
ALA 11
0.0001
ALA 11
LYS 12
-0.0001
LYS 12
GLU 13
0.0000
GLU 13
GLY 14
-0.0002
GLY 14
VAL 15
-0.0003
VAL 15
VAL 16
0.0004
VAL 16
ALA 17
-0.0002
ALA 17
ALA 18
0.0001
ALA 18
ALA 19
0.0002
ALA 19
GLU 20
0.0003
GLU 20
LYS 21
-0.0001
LYS 21
THR 22
0.0001
THR 22
LYS 23
0.0003
LYS 23
GLN 24
0.0000
GLN 24
GLY 25
0.0006
GLY 25
VAL 26
0.0002
VAL 26
ALA 27
0.0001
ALA 27
GLU 28
-0.0003
GLU 28
ALA 29
0.0001
ALA 29
ALA 30
-0.0000
ALA 30
GLY 31
0.0003
GLY 31
LYS 32
-0.0004
LYS 32
THR 33
-0.0002
THR 33
LYS 34
0.0000
LYS 34
GLU 35
0.0001
GLU 35
GLY 36
-0.0002
GLY 36
VAL 37
0.0002
VAL 37
LEU 38
-0.0002
LEU 38
TYR 39
0.0002
TYR 39
VAL 40
-0.0001
VAL 40
GLY 41
-0.0001
GLY 41
SER 42
-0.0003
SER 42
LYS 43
-0.0002
LYS 43
THR 44
-0.0002
THR 44
LYS 45
-0.0001
LYS 45
GLU 46
0.0002
GLU 46
GLY 47
-0.0002
GLY 47
VAL 48
0.0002
VAL 48
VAL 49
0.0000
VAL 49
HIS 50
0.0001
HIS 50
GLY 51
-0.0003
GLY 51
VAL 52
0.0002
VAL 52
ALA 53
0.0000
ALA 53
THR 54
0.0002
THR 54
VAL 55
-0.0002
VAL 55
ALA 56
-0.0002
ALA 56
GLU 57
-0.0004
GLU 57
LYS 58
-0.0004
LYS 58
THR 59
0.0001
THR 59
LYS 60
0.0001
LYS 60
GLU 61
-0.0001
GLU 61
GLN 62
0.0002
GLN 62
VAL 63
-0.0001
VAL 63
THR 64
-0.0003
THR 64
ASN 65
-0.0001
ASN 65
VAL 66
-0.0000
VAL 66
GLY 67
0.0001
GLY 67
GLY 68
0.0001
GLY 68
ALA 69
0.0001
ALA 69
VAL 70
-0.0001
VAL 70
VAL 71
-0.0001
VAL 71
THR 72
0.0001
THR 72
GLY 73
0.0003
GLY 73
VAL 74
-0.0000
VAL 74
THR 75
-0.0001
THR 75
ALA 76
0.0002
ALA 76
VAL 77
-0.0001
VAL 77
ALA 78
0.0001
ALA 78
GLN 79
0.0001
GLN 79
LYS 80
-0.0000
LYS 80
THR 81
0.0001
THR 81
VAL 82
-0.0002
VAL 82
GLU 83
0.0001
GLU 83
GLY 84
0.0003
GLY 84
ALA 85
0.0002
ALA 85
GLY 86
0.0001
GLY 86
SER 87
0.0002
SER 87
ILE 88
-0.0000
ILE 88
ALA 89
0.0000
ALA 89
ALA 90
-0.0003
ALA 90
ALA 91
-0.0002
ALA 91
THR 92
-0.0002
THR 92
GLY 93
0.0007
GLY 93
PHE 94
-0.0002
PHE 94
VAL 95
-0.0001
VAL 95
LYS 96
0.0001
LYS 96
LYS 97
-0.0001
LYS 97
ASP 98
0.0002
ASP 98
GLN 99
-0.0005
GLN 99
LEU 100
-0.0003
LEU 100
GLY 101
-0.0006
GLY 101
LYS 102
-0.0010
LYS 102
ASN 103
0.0002
ASN 103
GLU 104
0.0001
GLU 104
GLU 105
-0.0002
GLU 105
GLY 106
0.0004
GLY 106
ALA 107
-0.0012
ALA 107
PRO 108
-0.0010
PRO 108
GLN 109
-0.0000
GLN 109
GLU 110
-0.0010
GLU 110
GLY 111
-0.0005
GLY 111
ILE 112
0.0004
ILE 112
LEU 113
-0.0005
LEU 113
GLU 114
-0.0001
GLU 114
ASP 115
0.0000
ASP 115
MET 116
-0.0002
MET 116
PRO 117
-0.0004
PRO 117
VAL 118
-0.0001
VAL 118
ASP 119
-0.0002
ASP 119
PRO 120
0.0004
PRO 120
ASP 121
-0.0001
ASP 121
ASN 122
0.0002
ASN 122
GLU 123
-0.0002
GLU 123
ALA 124
-0.0003
ALA 124
TYR 125
-0.0003
TYR 125
GLU 126
0.0001
GLU 126
MET 127
-0.0001
MET 127
PRO 128
0.0006
PRO 128
SER 129
-0.0002
SER 129
GLU 130
-0.0001
GLU 130
GLU 131
0.0001
GLU 131
GLY 132
-0.0005
GLY 132
TYR 133
0.0003
TYR 133
GLN 134
-0.0006
GLN 134
ASP 135
0.0006
ASP 135
TYR 136
0.0002
TYR 136
GLU 137
0.0003
GLU 137
PRO 138
-0.0004
PRO 138
GLU 139
0.0001
GLU 139
ALA 140
0.0004
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.