This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
ASP 2
0.0001
ASP 2
VAL 3
-0.0010
VAL 3
PHE 4
0.0003
PHE 4
MET 5
0.0004
MET 5
LYS 6
-0.0002
LYS 6
GLY 7
-0.0003
GLY 7
LEU 8
0.0005
LEU 8
SER 9
-0.0005
SER 9
LYS 10
-0.0002
LYS 10
ALA 11
-0.0005
ALA 11
LYS 12
0.0006
LYS 12
GLU 13
-0.0006
GLU 13
GLY 14
-0.0008
GLY 14
VAL 15
0.0009
VAL 15
VAL 16
0.0001
VAL 16
ALA 17
-0.0005
ALA 17
ALA 18
-0.0000
ALA 18
ALA 19
0.0021
ALA 19
GLU 20
-0.0005
GLU 20
LYS 21
-0.0009
LYS 21
THR 22
0.0012
THR 22
LYS 23
0.0014
LYS 23
GLN 24
-0.0015
GLN 24
GLY 25
-0.0018
GLY 25
VAL 26
0.0033
VAL 26
ALA 27
-0.0012
ALA 27
GLU 28
-0.0019
GLU 28
ALA 29
0.0006
ALA 29
ALA 30
0.0051
ALA 30
GLY 31
-0.0026
GLY 31
LYS 32
0.0003
LYS 32
THR 33
0.0019
THR 33
LYS 34
0.0001
LYS 34
GLU 35
-0.0010
GLU 35
GLY 36
-0.0030
GLY 36
VAL 37
0.0045
VAL 37
LEU 38
0.0001
LEU 38
TYR 39
-0.0021
TYR 39
VAL 40
0.0010
VAL 40
GLY 41
0.0052
GLY 41
SER 42
-0.0048
SER 42
LYS 43
0.0011
LYS 43
THR 44
0.0036
THR 44
LYS 45
-0.0007
LYS 45
GLU 46
-0.0019
GLU 46
GLY 47
-0.0009
GLY 47
VAL 48
0.0043
VAL 48
VAL 49
-0.0016
VAL 49
HIS 50
-0.0026
HIS 50
GLY 51
-0.0012
GLY 51
VAL 52
0.0043
VAL 52
ALA 53
-0.0036
ALA 53
THR 54
-0.0007
THR 54
VAL 55
0.0027
VAL 55
ALA 56
0.0009
ALA 56
GLU 57
-0.0030
GLU 57
LYS 58
-0.0007
LYS 58
THR 59
0.0024
THR 59
LYS 60
-0.0026
LYS 60
GLU 61
-0.0017
GLU 61
GLN 62
-0.0017
GLN 62
VAL 63
0.0025
VAL 63
THR 64
-0.0038
THR 64
ASN 65
-0.0009
ASN 65
VAL 66
0.0016
VAL 66
GLY 67
0.0037
GLY 67
GLY 68
-0.0053
GLY 68
ALA 69
-0.0009
ALA 69
VAL 70
0.0055
VAL 70
VAL 71
-0.0024
VAL 71
THR 72
-0.0031
THR 72
GLY 73
-0.0017
GLY 73
VAL 74
0.0051
VAL 74
THR 75
-0.0033
THR 75
ALA 76
-0.0018
ALA 76
VAL 77
0.0021
VAL 77
ALA 78
0.0025
ALA 78
GLN 79
-0.0035
GLN 79
LYS 80
-0.0014
LYS 80
THR 81
0.0037
THR 81
VAL 82
-0.0033
VAL 82
GLU 83
-0.0020
GLU 83
GLY 84
-0.0040
GLY 84
ALA 85
0.0006
ALA 85
GLY 86
-0.0051
GLY 86
SER 87
-0.0058
SER 87
ILE 88
0.0016
ILE 88
ALA 89
0.0010
ALA 89
ALA 90
-0.0057
ALA 90
ALA 91
0.0001
ALA 91
THR 92
0.0009
THR 92
GLY 93
-0.0065
GLY 93
PHE 94
0.0027
PHE 94
VAL 95
0.0006
VAL 95
LYS 96
0.0010
LYS 96
LYS 97
-0.0009
LYS 97
ASP 98
0.0028
ASP 98
GLN 99
-0.0006
GLN 99
LEU 100
0.0023
LEU 100
GLY 101
0.0003
GLY 101
LYS 102
0.0016
LYS 102
ASN 103
-0.0033
ASN 103
GLU 104
-0.0005
GLU 104
GLU 105
0.0004
GLU 105
GLY 106
0.0028
GLY 106
ALA 107
0.0005
ALA 107
PRO 108
-0.0025
PRO 108
GLN 109
-0.0022
GLN 109
GLU 110
-0.0007
GLU 110
GLY 111
0.0003
GLY 111
ILE 112
-0.0007
ILE 112
LEU 113
0.0017
LEU 113
GLU 114
-0.0020
GLU 114
ASP 115
0.0006
ASP 115
MET 116
0.0005
MET 116
PRO 117
-0.0002
PRO 117
VAL 118
0.0014
VAL 118
ASP 119
-0.0003
ASP 119
PRO 120
0.0006
PRO 120
ASP 121
0.0007
ASP 121
ASN 122
0.0007
ASN 122
GLU 123
0.0014
GLU 123
ALA 124
-0.0009
ALA 124
TYR 125
0.0021
TYR 125
GLU 126
0.0008
GLU 126
MET 127
0.0045
MET 127
PRO 128
-0.0002
PRO 128
SER 129
0.0017
SER 129
GLU 130
0.0013
GLU 130
GLU 131
-0.0004
GLU 131
GLY 132
-0.0005
GLY 132
TYR 133
0.0001
TYR 133
GLN 134
0.0003
GLN 134
ASP 135
-0.0002
ASP 135
TYR 136
-0.0001
TYR 136
GLU 137
0.0006
GLU 137
PRO 138
-0.0002
PRO 138
GLU 139
0.0002
GLU 139
ALA 140
0.0002
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.