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***  VIRAL PROTEIN/RNA BINDING PROTEIN 31-JUL-12 4B4N  ***

CA strain for 22101122370966482

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1ILE 2 -0.0790
ILE 2VAL 3 0.2444
VAL 3GLN 4 -0.1698
GLN 4ASN 5 0.0468
ASN 5LEU 6 -0.0788
LEU 6GLN 7 0.0280
GLN 7GLY 8 -0.0184
GLY 8GLN 9 0.0261
GLN 9MET 10 -0.2350
MET 10VAL 11 0.1385
VAL 11HIS 12 0.1247
HIS 12GLN 13 0.0732
GLN 13ALA 14 0.0602
ALA 14ILE 15 0.1185
ILE 15SER 16 -0.0395
SER 16PRO 17 0.1166
PRO 17ARG 18 -0.1252
ARG 18THR 19 0.0796
THR 19LEU 20 -0.0193
LEU 20ASN 21 -0.0233
ASN 21ALA 22 0.0671
ALA 22TRP 23 0.0038
TRP 23VAL 24 0.0380
VAL 24LYS 25 -0.0417
LYS 25VAL 26 0.0378
VAL 26VAL 27 -0.0416
VAL 27GLU 28 0.0071
GLU 28GLU 29 -0.0023
GLU 29LYS 30 0.0167
LYS 30ALA 31 -0.0107
ALA 31PHE 32 0.0246
PHE 32SER 33 0.0055
SER 33PRO 34 -0.0006
PRO 34GLU 35 0.0153
GLU 35VAL 36 0.0158
VAL 36ILE 37 0.0182
ILE 37PRO 38 0.0783
PRO 38MET 39 0.0665
MET 39PHE 40 0.0266
PHE 40SER 41 -0.0358
SER 41ALA 42 0.1468
ALA 42LEU 43 0.0366
LEU 43SER 44 0.0265
SER 44GLU 45 -0.0078
GLU 45GLY 46 -0.2250
GLY 46ALA 47 -0.0256
ALA 47THR 48 -0.1259
THR 48PRO 49 0.0007
PRO 49GLN 50 -0.0192
GLN 50ASP 51 -0.0813
ASP 51LEU 52 0.0466
LEU 52ASN 53 -0.0640
ASN 53THR 54 -0.1705
THR 54MET 55 0.0330
MET 55LEU 56 -0.0590
LEU 56ASN 57 -0.0082
ASN 57THR 58 -0.2387
THR 58VAL 59 0.0127
VAL 59GLY 60 0.0058
GLY 60GLY 61 0.0522
GLY 61HIS 62 -0.0108
HIS 62GLN 63 -0.0527
GLN 63ALA 64 -0.0209
ALA 64ALA 65 -0.0055
ALA 65MET 66 0.0891
MET 66GLN 67 -0.0755
GLN 67MET 68 0.1616
MET 68LEU 69 -0.0011
LEU 69LYS 70 0.0737
LYS 70GLU 71 0.0063
GLU 71THR 72 0.0267
THR 72ILE 73 0.0496
ILE 73ASN 74 -0.0078
ASN 74GLU 75 -0.0056
GLU 75GLU 76 -0.0067
GLU 76ALA 77 0.0556
ALA 77ALA 78 -0.0008
ALA 78GLU 79 -0.1001
GLU 79TRP 80 -0.0484
TRP 80ASP 81 0.0896
ASP 81ARG 82 -0.1009
ARG 82LEU 83 0.0046
LEU 83HIS 84 -0.0648
HIS 84PRO 85 0.1461
PRO 85VAL 86 -0.0150
VAL 86ARG 97 -0.0045
ARG 97GLU 98 -0.0451
GLU 98PRO 99 0.0190
PRO 99ARG 100 0.0499
ARG 100GLY 101 0.0182
GLY 101SER 102 -0.0191
SER 102ASP 103 0.0986
ASP 103ILE 104 -0.0069
ILE 104ALA 105 0.0209
ALA 105GLY 106 0.0820
GLY 106THR 107 -0.0066
THR 107THR 108 0.1054
THR 108SER 109 0.0483
SER 109THR 110 0.0061
THR 110LEU 111 -0.2116
LEU 111GLN 112 0.0579
GLN 112GLU 113 -0.1185
GLU 113GLN 114 -0.0120
GLN 114ILE 115 0.0131
ILE 115GLY 116 -0.0653
GLY 116TRP 117 -0.0733
TRP 117MET 118 0.1899
MET 118THR 119 -0.2021
THR 119HIS 120 0.1225
HIS 120ASN 121 0.0709
ASN 121PRO 122 -0.0602
PRO 122PRO 123 -0.0494
PRO 123ILE 124 0.0156
ILE 124PRO 125 -0.1097
PRO 125VAL 126 0.0080
VAL 126GLY 127 0.0203
GLY 127GLU 128 -0.0417
GLU 128ILE 129 0.3392
ILE 129TYR 130 -0.0250
TYR 130LYS 131 0.0585
LYS 131ARG 132 0.1631
ARG 132ARG 132 0.1436
ARG 132TRP 133 0.0038
TRP 133ILE 134 0.0899
ILE 134ILE 135 0.0181
ILE 135LEU 136 0.1310
LEU 136GLY 137 -0.0412
GLY 137LEU 138 0.0795
LEU 138ASN 139 -0.0046
ASN 139LYS 140 0.0850
LYS 140ILE 141 0.0218
ILE 141VAL 142 0.0843
VAL 142ARG 143 0.0112
ARG 143MET 144 0.0328
MET 144TYR 145 0.0092
TYR 145SER 146 0.0779
SER 146PRO 322 0.0758
PRO 322VAL 323 0.0371
VAL 323LEU 324 -0.0449
LEU 324PHE 325 0.0037
PHE 325PRO 326 0.0363
PRO 326GLY 327 0.0032
GLY 327GLN 328 0.0761
GLN 328PRO 329 -0.1056
PRO 329PHE 330 0.0342
PHE 330GLY 331 0.1070
GLY 331GLN 332 -0.0330
GLN 332PRO 333 -0.0089
PRO 333PRO 334 -0.0020
PRO 334LEU 335 0.0425
LEU 335GLY 336 -0.0227

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.