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***  VIRAL PROTEIN/RNA BINDING PROTEIN 31-JUL-12 4B4N  ***

CA strain for 22101122370966482

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1ILE 2 -0.0348
ILE 2VAL 3 -0.0533
VAL 3GLN 4 -0.1326
GLN 4ASN 5 -0.0188
ASN 5LEU 6 0.0280
LEU 6GLN 7 -0.0334
GLN 7GLY 8 -0.0527
GLY 8GLN 9 0.0252
GLN 9MET 10 -0.0382
MET 10VAL 11 0.0379
VAL 11HIS 12 0.5022
HIS 12GLN 13 0.0262
GLN 13ALA 14 0.1363
ALA 14ILE 15 0.0635
ILE 15SER 16 -0.0121
SER 16PRO 17 0.0462
PRO 17ARG 18 -0.0173
ARG 18THR 19 0.0229
THR 19LEU 20 -0.0042
LEU 20ASN 21 -0.0168
ASN 21ALA 22 0.0138
ALA 22TRP 23 0.0024
TRP 23VAL 24 0.0016
VAL 24LYS 25 -0.0169
LYS 25VAL 26 0.0144
VAL 26VAL 27 -0.0082
VAL 27GLU 28 -0.0055
GLU 28GLU 29 -0.0002
GLU 29LYS 30 0.0086
LYS 30ALA 31 -0.0033
ALA 31PHE 32 0.0187
PHE 32SER 33 -0.0054
SER 33PRO 34 -0.0027
PRO 34GLU 35 -0.0031
GLU 35VAL 36 0.0094
VAL 36ILE 37 0.0192
ILE 37PRO 38 0.0055
PRO 38MET 39 0.0141
MET 39PHE 40 0.0273
PHE 40SER 41 -0.0069
SER 41ALA 42 0.0489
ALA 42LEU 43 -0.0022
LEU 43SER 44 0.0241
SER 44GLU 45 -0.0432
GLU 45GLY 46 -0.0290
GLY 46ALA 47 -0.0899
ALA 47THR 48 0.0143
THR 48PRO 49 -0.0154
PRO 49GLN 50 0.0487
GLN 50ASP 51 -0.0255
ASP 51LEU 52 0.0526
LEU 52ASN 53 0.0032
ASN 53THR 54 -0.0220
THR 54MET 55 0.0039
MET 55LEU 56 0.0090
LEU 56ASN 57 -0.0033
ASN 57THR 58 -0.0491
THR 58VAL 59 0.0350
VAL 59GLY 60 -0.0040
GLY 60GLY 61 0.0084
GLY 61HIS 62 -0.0014
HIS 62GLN 63 -0.0172
GLN 63ALA 64 0.0006
ALA 64ALA 65 -0.0039
ALA 65MET 66 0.0081
MET 66GLN 67 0.0020
GLN 67MET 68 -0.0042
MET 68LEU 69 -0.0005
LEU 69LYS 70 -0.0035
LYS 70GLU 71 0.0091
GLU 71THR 72 -0.0149
THR 72ILE 73 0.0208
ILE 73ASN 74 -0.0071
ASN 74GLU 75 0.0013
GLU 75GLU 76 -0.0136
GLU 76ALA 77 0.0148
ALA 77ALA 78 0.0061
ALA 78GLU 79 -0.0058
GLU 79TRP 80 -0.0219
TRP 80ASP 81 -0.0112
ASP 81ARG 82 0.0120
ARG 82LEU 83 -0.0016
LEU 83HIS 84 -0.0065
HIS 84PRO 85 0.0026
PRO 85VAL 86 0.0027
VAL 86ARG 97 0.0294
ARG 97GLU 98 0.0003
GLU 98PRO 99 0.0012
PRO 99ARG 100 -0.0096
ARG 100GLY 101 0.0043
GLY 101SER 102 0.0114
SER 102ASP 103 0.0087
ASP 103ILE 104 0.0034
ILE 104ALA 105 -0.0074
ALA 105GLY 106 0.0371
GLY 106THR 107 0.0326
THR 107THR 108 -0.0287
THR 108SER 109 0.0475
SER 109THR 110 0.0517
THR 110LEU 111 0.1059
LEU 111GLN 112 -0.0492
GLN 112GLU 113 0.0182
GLU 113GLN 114 -0.0178
GLN 114ILE 115 0.0727
ILE 115GLY 116 -0.0176
GLY 116TRP 117 0.0064
TRP 117MET 118 -0.0443
MET 118THR 119 0.0267
THR 119HIS 120 -0.0245
HIS 120ASN 121 -0.0158
ASN 121PRO 122 0.0110
PRO 122PRO 123 0.0076
PRO 123ILE 124 -0.0343
ILE 124PRO 125 0.0607
PRO 125VAL 126 0.0176
VAL 126GLY 127 0.0032
GLY 127GLU 128 0.0018
GLU 128ILE 129 -0.0378
ILE 129TYR 130 0.0124
TYR 130LYS 131 0.0090
LYS 131ARG 132 -0.0149
ARG 132ARG 132 -0.0000
ARG 132TRP 133 -0.0181
TRP 133ILE 134 0.0344
ILE 134ILE 135 0.0108
ILE 135LEU 136 -0.0062
LEU 136GLY 137 0.0008
GLY 137LEU 138 0.0177
LEU 138ASN 139 -0.0103
ASN 139LYS 140 0.0007
LYS 140ILE 141 0.0197
ILE 141VAL 142 0.0014
VAL 142ARG 143 -0.0107
ARG 143MET 144 0.0052
MET 144TYR 145 0.0002
TYR 145SER 146 0.0119
SER 146PRO 322 0.0090
PRO 322VAL 323 0.0148
VAL 323LEU 324 -0.0149
LEU 324PHE 325 0.0069
PHE 325PRO 326 -0.0066
PRO 326GLY 327 0.0008
GLY 327GLN 328 0.0034
GLN 328PRO 329 0.0046
PRO 329PHE 330 0.0059
PHE 330GLY 331 -0.0066
GLY 331GLN 332 0.0212
GLN 332PRO 333 -0.0064
PRO 333PRO 334 0.0035
PRO 334LEU 335 -0.0025
LEU 335GLY 336 0.0038

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.