This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 1
ILE 2
0.1434
ILE 2
VAL 3
-0.1692
VAL 3
GLN 4
0.2131
GLN 4
ASN 5
-0.0755
ASN 5
LEU 6
0.1300
LEU 6
GLN 7
-0.0410
GLN 7
GLY 8
-0.0020
GLY 8
GLN 9
-0.0210
GLN 9
MET 10
0.0558
MET 10
VAL 11
-0.1097
VAL 11
HIS 12
-0.1990
HIS 12
GLN 13
-0.0149
GLN 13
ALA 14
0.0027
ALA 14
ILE 15
-0.0466
ILE 15
SER 16
-0.0100
SER 16
PRO 17
0.2381
PRO 17
ARG 18
-0.2550
ARG 18
THR 19
0.0858
THR 19
LEU 20
0.0148
LEU 20
ASN 21
-0.0117
ASN 21
ALA 22
0.1131
ALA 22
TRP 23
-0.0116
TRP 23
VAL 24
0.0547
VAL 24
LYS 25
-0.0145
LYS 25
VAL 26
0.0211
VAL 26
VAL 27
-0.0579
VAL 27
GLU 28
0.0307
GLU 28
GLU 29
0.0000
GLU 29
LYS 30
-0.0078
LYS 30
ALA 31
-0.0080
ALA 31
PHE 32
-0.0299
PHE 32
SER 33
0.0377
SER 33
PRO 34
0.0111
PRO 34
GLU 35
0.0368
GLU 35
VAL 36
0.0036
VAL 36
ILE 37
-0.0600
ILE 37
PRO 38
0.1082
PRO 38
MET 39
0.0706
MET 39
PHE 40
-0.0309
PHE 40
SER 41
-0.0374
SER 41
ALA 42
0.1131
ALA 42
LEU 43
0.0249
LEU 43
SER 44
0.0641
SER 44
GLU 45
0.0418
GLU 45
GLY 46
-0.0227
GLY 46
ALA 47
0.0384
ALA 47
THR 48
-0.0970
THR 48
PRO 49
0.0065
PRO 49
GLN 50
-0.0358
GLN 50
ASP 51
-0.0049
ASP 51
LEU 52
-0.0006
LEU 52
ASN 53
-0.1126
ASN 53
THR 54
-0.1515
THR 54
MET 55
0.0430
MET 55
LEU 56
-0.1138
LEU 56
ASN 57
-0.0330
ASN 57
THR 58
-0.2080
THR 58
VAL 59
-0.0585
VAL 59
GLY 60
0.0118
GLY 60
GLY 61
0.0819
GLY 61
HIS 62
-0.0143
HIS 62
GLN 63
-0.0359
GLN 63
ALA 64
-0.0353
ALA 64
ALA 65
0.0003
ALA 65
MET 66
0.1399
MET 66
GLN 67
-0.1287
GLN 67
MET 68
0.2603
MET 68
LEU 69
0.0070
LEU 69
LYS 70
0.1117
LYS 70
GLU 71
-0.0313
GLU 71
THR 72
0.0927
THR 72
ILE 73
-0.0060
ILE 73
ASN 74
0.0135
ASN 74
GLU 75
-0.0122
GLU 75
GLU 76
0.0491
GLU 76
ALA 77
0.0196
ALA 77
ALA 78
-0.0285
ALA 78
GLU 79
-0.0418
GLU 79
TRP 80
0.0771
TRP 80
ASP 81
0.0573
ASP 81
ARG 82
-0.0841
ARG 82
LEU 83
0.0253
LEU 83
HIS 84
0.0086
HIS 84
PRO 85
-0.0107
PRO 85
VAL 86
-0.0215
VAL 86
ARG 97
-0.1709
ARG 97
GLU 98
0.0088
GLU 98
PRO 99
0.0033
PRO 99
ARG 100
0.0268
ARG 100
GLY 101
0.0031
GLY 101
SER 102
-0.0233
SER 102
ASP 103
0.0392
ASP 103
ILE 104
-0.0400
ILE 104
ALA 105
0.0269
ALA 105
GLY 106
-0.0322
GLY 106
THR 107
-0.1013
THR 107
THR 108
0.1635
THR 108
SER 109
-0.0504
SER 109
THR 110
-0.0589
THR 110
LEU 111
-0.0739
LEU 111
GLN 112
0.0858
GLN 112
GLU 113
-0.0034
GLU 113
GLN 114
-0.0259
GLN 114
ILE 115
-0.0061
ILE 115
GLY 116
0.2016
GLY 116
TRP 117
-0.0771
TRP 117
MET 118
-0.0202
MET 118
THR 119
0.0224
THR 119
HIS 120
-0.0673
HIS 120
ASN 121
0.1020
ASN 121
PRO 122
-0.1064
PRO 122
PRO 123
-0.0889
PRO 123
ILE 124
0.1061
ILE 124
PRO 125
-0.2612
PRO 125
VAL 126
-0.0275
VAL 126
GLY 127
-0.0345
GLY 127
GLU 128
0.0232
GLU 128
ILE 129
0.2422
ILE 129
TYR 130
-0.0727
TYR 130
LYS 131
0.0227
LYS 131
ARG 132
0.1792
ARG 132
ARG 132
-0.0000
ARG 132
TRP 133
0.0513
TRP 133
ILE 134
-0.0593
ILE 134
ILE 135
0.0130
ILE 135
LEU 136
0.1616
LEU 136
GLY 137
-0.0537
GLY 137
LEU 138
0.0253
LEU 138
ASN 139
0.0414
ASN 139
LYS 140
0.1241
LYS 140
ILE 141
-0.0634
ILE 141
VAL 142
0.1344
VAL 142
ARG 143
0.0783
ARG 143
MET 144
0.0427
MET 144
TYR 145
0.0153
TYR 145
SER 146
0.1184
SER 146
PRO 322
0.0645
PRO 322
VAL 323
-0.0276
VAL 323
LEU 324
0.0493
LEU 324
PHE 325
-0.0328
PHE 325
PRO 326
0.0874
PRO 326
GLY 327
0.0002
GLY 327
GLN 328
0.0873
GLN 328
PRO 329
-0.1468
PRO 329
PHE 330
0.0153
PHE 330
GLY 331
0.1680
GLY 331
GLN 332
-0.1267
GLN 332
PRO 333
0.0003
PRO 333
PRO 334
-0.0057
PRO 334
LEU 335
0.0792
LEU 335
GLY 336
-0.0571
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.