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***  VIRAL PROTEIN/RNA BINDING PROTEIN 31-JUL-12 4B4N  ***

CA strain for 22101122370966482

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1ILE 2 0.1434
ILE 2VAL 3 -0.1692
VAL 3GLN 4 0.2131
GLN 4ASN 5 -0.0755
ASN 5LEU 6 0.1300
LEU 6GLN 7 -0.0410
GLN 7GLY 8 -0.0020
GLY 8GLN 9 -0.0210
GLN 9MET 10 0.0558
MET 10VAL 11 -0.1097
VAL 11HIS 12 -0.1990
HIS 12GLN 13 -0.0149
GLN 13ALA 14 0.0027
ALA 14ILE 15 -0.0466
ILE 15SER 16 -0.0100
SER 16PRO 17 0.2381
PRO 17ARG 18 -0.2550
ARG 18THR 19 0.0858
THR 19LEU 20 0.0148
LEU 20ASN 21 -0.0117
ASN 21ALA 22 0.1131
ALA 22TRP 23 -0.0116
TRP 23VAL 24 0.0547
VAL 24LYS 25 -0.0145
LYS 25VAL 26 0.0211
VAL 26VAL 27 -0.0579
VAL 27GLU 28 0.0307
GLU 28GLU 29 0.0000
GLU 29LYS 30 -0.0078
LYS 30ALA 31 -0.0080
ALA 31PHE 32 -0.0299
PHE 32SER 33 0.0377
SER 33PRO 34 0.0111
PRO 34GLU 35 0.0368
GLU 35VAL 36 0.0036
VAL 36ILE 37 -0.0600
ILE 37PRO 38 0.1082
PRO 38MET 39 0.0706
MET 39PHE 40 -0.0309
PHE 40SER 41 -0.0374
SER 41ALA 42 0.1131
ALA 42LEU 43 0.0249
LEU 43SER 44 0.0641
SER 44GLU 45 0.0418
GLU 45GLY 46 -0.0227
GLY 46ALA 47 0.0384
ALA 47THR 48 -0.0970
THR 48PRO 49 0.0065
PRO 49GLN 50 -0.0358
GLN 50ASP 51 -0.0049
ASP 51LEU 52 -0.0006
LEU 52ASN 53 -0.1126
ASN 53THR 54 -0.1515
THR 54MET 55 0.0430
MET 55LEU 56 -0.1138
LEU 56ASN 57 -0.0330
ASN 57THR 58 -0.2080
THR 58VAL 59 -0.0585
VAL 59GLY 60 0.0118
GLY 60GLY 61 0.0819
GLY 61HIS 62 -0.0143
HIS 62GLN 63 -0.0359
GLN 63ALA 64 -0.0353
ALA 64ALA 65 0.0003
ALA 65MET 66 0.1399
MET 66GLN 67 -0.1287
GLN 67MET 68 0.2603
MET 68LEU 69 0.0070
LEU 69LYS 70 0.1117
LYS 70GLU 71 -0.0313
GLU 71THR 72 0.0927
THR 72ILE 73 -0.0060
ILE 73ASN 74 0.0135
ASN 74GLU 75 -0.0122
GLU 75GLU 76 0.0491
GLU 76ALA 77 0.0196
ALA 77ALA 78 -0.0285
ALA 78GLU 79 -0.0418
GLU 79TRP 80 0.0771
TRP 80ASP 81 0.0573
ASP 81ARG 82 -0.0841
ARG 82LEU 83 0.0253
LEU 83HIS 84 0.0086
HIS 84PRO 85 -0.0107
PRO 85VAL 86 -0.0215
VAL 86ARG 97 -0.1709
ARG 97GLU 98 0.0088
GLU 98PRO 99 0.0033
PRO 99ARG 100 0.0268
ARG 100GLY 101 0.0031
GLY 101SER 102 -0.0233
SER 102ASP 103 0.0392
ASP 103ILE 104 -0.0400
ILE 104ALA 105 0.0269
ALA 105GLY 106 -0.0322
GLY 106THR 107 -0.1013
THR 107THR 108 0.1635
THR 108SER 109 -0.0504
SER 109THR 110 -0.0589
THR 110LEU 111 -0.0739
LEU 111GLN 112 0.0858
GLN 112GLU 113 -0.0034
GLU 113GLN 114 -0.0259
GLN 114ILE 115 -0.0061
ILE 115GLY 116 0.2016
GLY 116TRP 117 -0.0771
TRP 117MET 118 -0.0202
MET 118THR 119 0.0224
THR 119HIS 120 -0.0673
HIS 120ASN 121 0.1020
ASN 121PRO 122 -0.1064
PRO 122PRO 123 -0.0889
PRO 123ILE 124 0.1061
ILE 124PRO 125 -0.2612
PRO 125VAL 126 -0.0275
VAL 126GLY 127 -0.0345
GLY 127GLU 128 0.0232
GLU 128ILE 129 0.2422
ILE 129TYR 130 -0.0727
TYR 130LYS 131 0.0227
LYS 131ARG 132 0.1792
ARG 132ARG 132 -0.0000
ARG 132TRP 133 0.0513
TRP 133ILE 134 -0.0593
ILE 134ILE 135 0.0130
ILE 135LEU 136 0.1616
LEU 136GLY 137 -0.0537
GLY 137LEU 138 0.0253
LEU 138ASN 139 0.0414
ASN 139LYS 140 0.1241
LYS 140ILE 141 -0.0634
ILE 141VAL 142 0.1344
VAL 142ARG 143 0.0783
ARG 143MET 144 0.0427
MET 144TYR 145 0.0153
TYR 145SER 146 0.1184
SER 146PRO 322 0.0645
PRO 322VAL 323 -0.0276
VAL 323LEU 324 0.0493
LEU 324PHE 325 -0.0328
PHE 325PRO 326 0.0874
PRO 326GLY 327 0.0002
GLY 327GLN 328 0.0873
GLN 328PRO 329 -0.1468
PRO 329PHE 330 0.0153
PHE 330GLY 331 0.1680
GLY 331GLN 332 -0.1267
GLN 332PRO 333 0.0003
PRO 333PRO 334 -0.0057
PRO 334LEU 335 0.0792
LEU 335GLY 336 -0.0571

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.