Should you encounter any unexpected behaviour,
please let us know.

* Phrb Pseudomonas fluorescens model 5 *

CA strain for 221006205537110470

--- normal mode 13 ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA i CA i+1 vari
MET 1 GLN 2 -0.0004

GLN 2 LEU 3 0.0003

LEU 3 ILE 4 -0.0231

ILE 4 TRP 5 0.0003

TRP 5 LEU 6 0.0000

LEU 6 ARG 7 -0.0181

ARG 7 SER 8 0.0000

SER 8 ASP 9 -0.0001

ASP 9 LEU 10 -0.0169

LEU 10 ARG 11 -0.0003

ARG 11 VAL 12 -0.0000

VAL 12 HIS 13 0.0728

HIS 13 ASP 14 -0.0002

ASP 14 ASN 15 -0.0002

ASN 15 THR 16 -0.0975

THR 16 ALA 17 -0.0004

ALA 17 LEU 18 -0.0002

LEU 18 SER 19 -0.0106

SER 19 ALA 20 0.0002

ALA 20 ALA 21 0.0003

ALA 21 ALA 22 0.0571

ALA 22 VAL 23 0.0000

VAL 23 ARG 24 0.0003

ARG 24 GLY 25 0.0289

GLY 25 PRO 26 -0.0002

PRO 26 CYS 27 0.0001

CYS 27 VAL 28 -0.0204

VAL 28 ALA 29 0.0002

ALA 29 VAL 30 -0.0003

VAL 30 TYR 31 -0.0319

TYR 31 LEU 32 0.0000

LEU 32 LEU 33 0.0002

LEU 33 SER 34 -0.0611

SER 34 PRO 35 0.0000

PRO 35 ALA 36 -0.0002

ALA 36 GLN 37 -0.0299

GLN 37 TRP 38 0.0000

TRP 38 LEU 39 0.0001

LEU 39 ALA 40 -0.1953

ALA 40 HIS 41 -0.0003

HIS 41 ASP 42 -0.0000

ASP 42 ASP 43 -0.0820

ASP 43 ALA 44 -0.0002

ALA 44 PRO 45 -0.0001

PRO 45 CYS 46 0.0524

CYS 46 LYS 47 -0.0000

LYS 47 VAL 48 0.0000

VAL 48 ASP 49 -0.0065

ASP 49 PHE 50 -0.0005

PHE 50 TRP 51 -0.0004

TRP 51 LEU 52 -0.0506

LEU 52 ARG 53 0.0002

ARG 53 ASN 54 0.0002

ASN 54 LEU 55 -0.0378

LEU 55 ARG 56 -0.0001

ARG 56 ASP 57 0.0003

ASP 57 LEU 58 -0.0621

LEU 58 SER 59 -0.0002

SER 59 GLN 60 0.0004

GLN 60 THR 61 0.0678

THR 61 LEU 62 -0.0000

LEU 62 ALA 63 0.0001

ALA 63 ARG 64 -0.0012

ARG 64 LEU 65 0.0000

LEU 65 ASN 66 -0.0002

ASN 66 ILE 67 0.0046

ILE 67 PRO 68 -0.0002

PRO 68 LEU 69 -0.0002

LEU 69 LEU 70 0.0130

LEU 70 ILE 71 -0.0000

ILE 71 ARG 72 0.0002

ARG 72 GLU 73 -0.0644

GLU 73 ALA 74 -0.0002

ALA 74 SER 75 -0.0001

SER 75 HIS 76 -0.0703

HIS 76 TRP 77 -0.0000

TRP 77 ASP 78 0.0000

ASP 78 ASP 79 -0.0290

ASP 79 ALA 80 -0.0003

ALA 80 PRO 81 0.0001

PRO 81 ARG 82 -0.0335

ARG 82 VAL 83 -0.0001

VAL 83 LEU 84 0.0001

LEU 84 ALA 85 0.0085

ALA 85 GLY 86 -0.0001

GLY 86 LEU 87 0.0003

LEU 87 CYS 88 -0.0006

CYS 88 ASP 89 0.0003

ASP 89 GLU 90 -0.0002

GLU 90 LEU 91 0.0083

LEU 91 GLY 92 0.0004

GLY 92 VAL 93 0.0001

VAL 93 GLU 94 -0.0053

GLU 94 ALA 95 -0.0002

ALA 95 VAL 96 -0.0000

VAL 96 HIS 97 -0.0468

HIS 97 ALA 98 -0.0003

ALA 98 ASN 99 0.0001

ASN 99 ASP 100 0.1403

ASP 100 GLU 101 0.0003

GLU 101 TYR 102 0.0004

TYR 102 GLY 103 0.0540

GLY 103 VAL 104 0.0001

VAL 104 HIS 105 -0.0000

HIS 105 GLU 106 0.0758

GLU 106 THR 107 -0.0002

THR 107 ARG 108 0.0001

ARG 108 ARG 109 -0.0496

ARG 109 ASP 110 0.0004

ASP 110 ALA 111 -0.0006

ALA 111 ALA 112 -0.0437

ALA 112 VAL 113 -0.0002

VAL 113 ARG 114 -0.0002

ARG 114 GLN 115 -0.0482

GLN 115 ALA 116 0.0002

ALA 116 LEU 117 0.0001

LEU 117 GLU 118 0.0260

GLU 118 THR 119 0.0000

THR 119 ALA 120 0.0003

ALA 120 GLY 121 -0.0371

GLY 121 ILE 122 -0.0001

ILE 122 ALA 123 0.0002

ALA 123 TRP 124 -0.0055

TRP 124 HIS 125 -0.0000

HIS 125 ASN 126 -0.0001

ASN 126 TYR 127 -0.2440

TYR 127 LEU 128 -0.0002

LEU 128 ASP 129 -0.0004

ASP 129 GLN 130 0.0012

GLN 130 LEU 131 0.0003

LEU 131 LEU 132 0.0003

LEU 132 PHE 133 0.0641

PHE 133 GLN 134 0.0002

GLN 134 PRO 135 0.0003

PRO 135 GLY 136 0.0150

GLY 136 SER 137 0.0001

SER 137 VAL 138 0.0006

VAL 138 LEU 139 0.0443

LEU 139 THR 140 -0.0001

THR 140 ARG 141 -0.0000

ARG 141 THR 142 -0.0023

THR 142 GLY 143 0.0003

GLY 143 THR 144 0.0002

THR 144 TYR 145 -0.0277

TYR 145 PHE 146 0.0002

PHE 146 GLN 147 0.0002

GLN 147 VAL 148 0.0054

VAL 148 PHE 149 -0.0001

PHE 149 SER 150 0.0003

SER 150 GLN 151 -0.0025

GLN 151 PHE 152 -0.0003

PHE 152 ARG 153 -0.0000

ARG 153 LYS 154 -0.0123

LYS 154 VAL 155 -0.0001

VAL 155 CYS 156 0.0001

CYS 156 TYR 157 -0.0130

TYR 157 SER 158 -0.0001

SER 158 ARG 159 0.0000

ARG 159 LEU 160 0.0403

LEU 160 HIS 161 -0.0004

HIS 161 GLY 162 0.0000

GLY 162 SER 163 0.0514

SER 163 LEU 164 -0.0000

LEU 164 PRO 165 -0.0002

PRO 165 GLN 166 0.1691

GLN 166 LEU 167 0.0002

LEU 167 VAL 168 -0.0001

VAL 168 ALA 169 0.2252

ALA 169 PRO 170 0.0001

PRO 170 PRO 171 -0.0000

PRO 171 LYS 172 0.1062

LYS 172 THR 173 -0.0000

THR 173 GLN 174 -0.0001

GLN 174 ALA 175 0.0685

ALA 175 PRO 176 -0.0003

PRO 176 THR 177 -0.0001

THR 177 GLY 178 0.0132

GLY 178 ILE 179 0.0001

ILE 179 ASP 180 0.0001

ASP 180 SER 181 -0.0299

SER 181 ASP 182 -0.0002

ASP 182 SER 183 -0.0000

SER 183 ILE 184 -0.0571

ILE 184 PRO 185 -0.0000

PRO 185 GLU 186 -0.0002

GLU 186 GLN 187 -0.0564

GLN 187 LEU 188 -0.0002

LEU 188 ASP 189 0.0003

ASP 189 ASP 190 -0.0486

ASP 190 PHE 191 -0.0001

PHE 191 PRO 192 -0.0001

PRO 192 THR 193 0.0952

THR 193 PRO 194 0.0006

PRO 194 SER 195 -0.0003

SER 195 ALA 196 0.0716

ALA 196 HIS 197 0.0001

HIS 197 LEU 198 -0.0002

LEU 198 ARG 199 -0.1267

ARG 199 ALA 200 0.0002

ALA 200 LEU 201 0.0000

LEU 201 TRP 202 -0.1036

TRP 202 PRO 203 0.0004

PRO 203 ALA 204 -0.0000

ALA 204 GLY 205 -0.1794

GLY 205 GLU 206 -0.0001

GLU 206 ALA 207 0.0002

ALA 207 GLU 208 -0.1184

GLU 208 ALA 209 -0.0001

ALA 209 GLN 210 0.0002

GLN 210 ARG 211 -0.0234

ARG 211 ARG 212 0.0001

ARG 212 LEU 213 -0.0004

LEU 213 ASN 214 -0.0079

ASN 214 GLU 215 -0.0001

GLU 215 PHE 216 -0.0001

PHE 216 THR 217 0.0228

THR 217 ASP 218 0.0001

ASP 218 ALA 219 0.0004

ALA 219 GLN 220 -0.0168

GLN 220 ILE 221 0.0003

ILE 221 ASP 222 0.0001

ASP 222 TYR 223 0.0004

TYR 223 TYR 224 -0.0001

TYR 224 LYS 225 0.0004

LYS 225 ASP 226 -0.0176

ASP 226 GLU 227 -0.0000

GLU 227 ARG 228 0.0000

ARG 228 ASP 229 0.0197

ASP 229 LEU 230 0.0003

LEU 230 PRO 231 -0.0003

PRO 231 ALA 232 0.0084

ALA 232 LYS 233 0.0001

LYS 233 PRO 234 0.0000

PRO 234 GLY 235 -0.0511

GLY 235 THR 236 0.0000

THR 236 SER 237 -0.0005

SER 237 GLN 238 0.0345

GLN 238 LEU 239 0.0002

LEU 239 SER 240 -0.0000

SER 240 THR 241 0.0218

THR 241 TYR 242 -0.0002

TYR 242 LEU 243 0.0001

LEU 243 ALA 244 -0.0154

ALA 244 ALA 245 0.0000

ALA 245 GLY 246 -0.0001

GLY 246 ILE 247 -0.0173

ILE 247 LEU 248 0.0000

LEU 248 SER 249 -0.0003

SER 249 PRO 250 0.0350

PRO 250 ARG 251 -0.0002

ARG 251 GLN 252 0.0001

GLN 252 CYS 253 -0.0674

CYS 253 LEU 254 0.0002

LEU 254 HIS 255 -0.0000

HIS 255 ALA 256 -0.0335

ALA 256 ALA 257 -0.0002

ALA 257 LEU 258 0.0001

LEU 258 GLN 259 0.0286

GLN 259 SER 260 0.0000

SER 260 ASN 261 -0.0002

ASN 261 GLN 262 0.0226

GLN 262 GLY 263 -0.0001

GLY 263 GLU 264 -0.0002

GLU 264 PHE 265 0.0039

PHE 265 GLU 266 -0.0003

GLU 266 SER 267 -0.0000

SER 267 GLY 268 -0.0140

GLY 268 SER 269 0.0001

SER 269 VAL 270 0.0001

VAL 270 GLY 271 0.0197

GLY 271 VAL 272 0.0001

VAL 272 VAL 273 -0.0001

VAL 273 THR 274 0.0179

THR 274 TRP 275 -0.0000

TRP 275 ILE 276 -0.0000

ILE 276 ASN 277 0.0212

ASN 277 GLU 278 0.0003

GLU 278 LEU 279 -0.0000

LEU 279 LEU 280 0.0217

LEU 280 TRP 281 0.0003

TRP 281 ARG 282 -0.0004

ARG 282 GLU 283 -0.0243

GLU 283 PHE 284 0.0002

PHE 284 TYR 285 0.0000

TYR 285 LYS 286 0.0410

LYS 286 HIS 287 0.0001

HIS 287 ILE 288 -0.0001

ILE 288 LEU 289 -0.0274

LEU 289 VAL 290 0.0001

VAL 290 GLY 291 0.0002

GLY 291 TYR 292 0.0341

TYR 292 PRO 293 -0.0004

PRO 293 ARG 294 -0.0001

ARG 294 VAL 295 -0.0073

VAL 295 SER 296 -0.0001

SER 296 ARG 297 -0.0002

ARG 297 HIS 298 0.0838

HIS 298 ARG 299 -0.0002

ARG 299 ALA 300 -0.0001

ALA 300 PHE 301 0.0072

PHE 301 ARG 302 -0.0004

ARG 302 PRO 303 0.0001

PRO 303 GLU 304 0.0046

GLU 304 THR 305 -0.0005

THR 305 GLU 306 0.0002

GLU 306 ALA 307 -0.0342

ALA 307 LEU 308 0.0000

LEU 308 ALA 309 0.0000

ALA 309 TRP 310 0.0274

TRP 310 ARG 311 0.0001

ARG 311 HIS 312 0.0003

HIS 312 ALA 313 0.0544

ALA 313 PRO 314 -0.0001

PRO 314 GLU 315 0.0000

GLU 315 ASP 316 0.0067

ASP 316 LEU 317 -0.0002

LEU 317 ALA 318 -0.0002

ALA 318 ALA 319 0.0429

ALA 319 TRP 320 -0.0003

TRP 320 LYS 321 0.0002

LYS 321 GLU 322 0.0562

GLU 322 ALA 323 0.0000

ALA 323 ARG 324 0.0002

ARG 324 THR 325 -0.0332

THR 325 GLY 326 -0.0001

GLY 326 LEU 327 -0.0001

LEU 327 PRO 328 0.0042

PRO 328 ILE 329 0.0000

ILE 329 ILE 330 0.0003

ILE 330 ASP 331 0.0060

ASP 331 ALA 332 -0.0001

ALA 332 ALA 333 0.0002

ALA 333 MET 334 0.0324

MET 334 ARG 335 0.0002

ARG 335 GLN 336 0.0004

GLN 336 LEU 337 0.0916

LEU 337 LEU 338 0.0000

LEU 338 GLU 339 -0.0003

GLU 339 THR 340 -0.0637

THR 340 GLY 341 0.0002

GLY 341 TRP 342 -0.0004

TRP 342 MET 343 0.0022

MET 343 HIS 344 -0.0001

HIS 344 ASN 345 -0.0001

ASN 345 ARG 346 -0.0098

ARG 346 LEU 347 0.0002

LEU 347 ARG 348 -0.0001

ARG 348 MET 349 -0.0166

MET 349 VAL 350 0.0005

VAL 350 VAL 351 -0.0001

VAL 351 ALA 352 -0.0103

ALA 352 MET 353 -0.0003

MET 353 PHE 354 -0.0001

PHE 354 LEU 355 0.0273

LEU 355 THR 356 -0.0000

THR 356 LYS 357 -0.0001

LYS 357 ASN 358 0.0276

ASN 358 LEU 359 0.0001

LEU 359 LEU 360 -0.0004

LEU 360 ILE 361 -0.0644

ILE 361 ASP 362 -0.0004

ASP 362 TRP 363 0.0004

TRP 363 ARG 364 -0.0296

ARG 364 GLU 365 0.0005

GLU 365 GLY 366 0.0005

GLY 366 GLU 367 0.0426

GLU 367 ARG 368 0.0000

ARG 368 PHE 369 -0.0000

PHE 369 PHE 370 -0.0427

PHE 370 MET 371 0.0001

MET 371 ARG 372 -0.0002

ARG 372 HIS 373 0.1038

HIS 373 LEU 374 0.0002

LEU 374 ILE 375 -0.0002

ILE 375 ASP 376 -0.0119

ASP 376 GLY 377 0.0001

GLY 377 ASP 378 -0.0002

ASP 378 LEU 379 -0.0087

LEU 379 ALA 380 0.0001

ALA 380 ALA 381 -0.0002

ALA 381 ASN 382 -0.0175

ASN 382 ASN 383 0.0000

ASN 383 GLY 384 -0.0000

GLY 384 GLY 385 0.0340

GLY 385 TRP 386 -0.0002

TRP 386 GLN 387 0.0001

GLN 387 TRP 388 -0.0358

TRP 388 SER 389 0.0001

SER 389 SER 390 0.0002

SER 390 SER 391 -0.0265

SER 391 THR 392 -0.0002

THR 392 GLY 393 0.0004

GLY 393 THR 394 0.1134

THR 394 ASP 395 0.0004

ASP 395 SER 396 -0.0003

SER 396 ALA 397 0.1085

ALA 397 PRO 398 -0.0001

PRO 398 TYR 399 -0.0003

TYR 399 PHE 400 0.0300

PHE 400 ARG 401 0.0003

ARG 401 ILE 402 0.0001

ILE 402 PHE 403 -0.0221

PHE 403 ASN 404 -0.0000

ASN 404 PRO 405 -0.0001

PRO 405 LEU 406 -0.0408

LEU 406 SER 407 -0.0001

SER 407 GLN 408 0.0002

GLN 408 SER 409 -0.0104

SER 409 GLU 410 -0.0002

GLU 410 LYS 411 0.0002

LYS 411 PHE 412 0.0083

PHE 412 ASP 413 0.0002

ASP 413 SER 414 0.0004

SER 414 GLU 415 -0.0065

GLU 415 GLY 416 0.0000

GLY 416 LEU 417 0.0000

LEU 417 PHE 418 0.0613

PHE 418 ILE 419 0.0001

ILE 419 LYS 420 -0.0000

LYS 420 HIS 421 0.0919

HIS 421 TRP 422 0.0002

TRP 422 LEU 423 -0.0005

LEU 423 PRO 424 0.0281

PRO 424 GLU 425 -0.0000

GLU 425 LEU 426 0.0002

LEU 426 ALA 427 -0.0553

ALA 427 GLY 428 -0.0001

GLY 428 LEU 429 0.0002

LEU 429 ASN 430 0.0061

ASN 430 LYS 431 -0.0000

LYS 431 LYS 432 -0.0001

LYS 432 ASP 433 0.0495

ASP 433 ILE 434 -0.0001

ILE 434 HIS 435 -0.0001

HIS 435 ASN 436 -0.0825

ASN 436 PRO 437 -0.0002

PRO 437 ALA 438 0.0001

ALA 438 ASN 439 0.0563

ASN 439 MET 440 0.0002

MET 440 GLY 441 -0.0001

GLY 441 GLY 442 -0.2743

GLY 442 LEU 443 -0.0002

LEU 443 PHE 444 0.0001

PHE 444 GLY 445 -0.1640

GLY 445 VAL 446 0.0001

VAL 446 ALA 447 -0.0001

ALA 447 ASP 448 -0.2063

ASP 448 TYR 449 -0.0000

TYR 449 PRO 450 -0.0001

PRO 450 LEU 451 0.0288

LEU 451 PRO 452 0.0001

PRO 452 ILE 453 -0.0002

ILE 453 VAL 454 -0.0467

VAL 454 ASN 455 0.0001

ASN 455 LEU 456 -0.0002

LEU 456 GLY 457 -0.0034

GLY 457 GLN 458 0.0000

GLN 458 SER 459 -0.0002

SER 459 ARG 460 -0.0043

ARG 460 GLU 461 0.0001

GLU 461 ARG 462 -0.0003

ARG 462 ALA 463 0.0333

ALA 463 LEU 464 -0.0001

LEU 464 ALA 465 0.0001

ALA 465 ALA 466 0.0129

ALA 466 PHE 467 0.0002

PHE 467 LYS 468 0.0002

LYS 468 ASN 469 -0.0063

ASN 469 LEU 470 0.0001

LEU 470 PRO 471 -0.0001

PRO 471 THR 472 0.1018

THR 472 ARG 473 -0.0000

ARG 473 MET 474 -0.0001

MET 474 ASP 475 0.0634

ASP 475 ALA 476 -0.0003

ALA 476 ALA 477 -0.0002

ALA 477 GLY 478 0.1237

GLY 478 VAL 479 0.0002

VAL 479 TYR 480 -0.0003

TYR 480 ASP 481 0.0148

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.

Should you encounter any unexpected behaviour, please let us know.

*** Phrb Pseudomonas fluorescens model 5 ***

CA strain for 221006205537110470

--- normal mode 13 ---

Should you encounter any unexpected behaviour,
please let us know.

* Phrb Pseudomonas fluorescens model 5 *