This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
MET 1
GLN 2
-0.0628
GLN 2
ILE 3
-0.0484
ILE 3
PHE 4
-0.0284
PHE 4
VAL 5
-0.0001
VAL 5
LYS 6
-0.0367
LYS 6
THR 7
-0.0056
THR 7
LEU 8
-0.0618
LEU 8
THR 9
0.0787
THR 9
GLY 10
0.0237
GLY 10
LYS 11
-0.0792
LYS 11
THR 12
-0.0051
THR 12
ILE 13
-0.0228
ILE 13
THR 14
-0.0053
THR 14
LEU 15
-0.0897
LEU 15
GLU 16
-0.0043
GLU 16
VAL 17
-0.0649
VAL 17
GLU 18
0.0150
GLU 18
PRO 19
0.0065
PRO 19
SER 20
0.0039
SER 20
ASP 21
0.0184
ASP 21
THR 22
0.0120
THR 22
ILE 23
0.0221
ILE 23
GLU 24
0.0270
GLU 24
ASN 25
0.0266
ASN 25
VAL 26
-0.0108
VAL 26
LYS 27
0.1178
LYS 27
ALA 28
-0.0614
ALA 28
LYS 29
0.1108
LYS 29
ILE 30
0.0126
ILE 30
GLN 31
0.0984
GLN 31
ASP 32
0.0776
ASP 32
LYS 33
-0.0434
LYS 33
GLU 34
0.1110
GLU 34
GLY 35
0.0459
GLY 35
ILE 36
0.0413
ILE 36
PRO 37
0.0830
PRO 37
PRO 38
-0.0533
PRO 38
ASP 39
0.1990
ASP 39
GLN 40
-0.1021
GLN 40
GLN 41
0.0035
GLN 41
ARG 42
0.0675
ARG 42
LEU 43
-0.2105
LEU 43
ILE 44
0.0056
ILE 44
PHE 45
-0.2206
PHE 45
ALA 46
0.0412
ALA 46
GLY 47
-0.0316
GLY 47
LYS 48
0.0525
LYS 48
GLN 49
-0.1660
GLN 49
LEU 50
-0.0450
LEU 50
GLU 51
0.0804
GLU 51
ASP 52
0.0255
ASP 52
GLY 53
-0.0263
GLY 53
ARG 54
-0.0021
ARG 54
THR 55
-0.0064
THR 55
LEU 56
0.0132
LEU 56
SER 57
0.0048
SER 57
ASP 58
-0.0103
ASP 58
TYR 59
0.0307
TYR 59
ASN 60
-0.1369
ASN 60
ILE 61
0.0606
ILE 61
GLN 62
-0.0663
GLN 62
LYS 63
0.0324
LYS 63
GLU 64
0.0074
GLU 64
SER 65
-0.0833
SER 65
THR 66
-0.0376
THR 66
LEU 67
-0.0285
LEU 67
HSE 68
-0.0667
HSE 68
LEU 69
-0.0632
LEU 69
VAL 70
-0.0756
VAL 70
LEU 71
-0.1670
LEU 71
ARG 72
-0.0004
ARG 72
LEU 73
-0.3150
LEU 73
ARG 74
-0.0298
ARG 74
GLY 75
0.0331
GLY 75
GLY 76
0.0111
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.