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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 -0.0090
ASN 2ALA 3 -0.0051
ALA 3PHE 4 -0.0071
PHE 4LEU 5 0.0017
LEU 5CGU 6 0.0046
CGU 6CGU 7 0.0024
CGU 7LEU 8 -0.0054
LEU 8ARG 9 0.0035
ARG 9PRO 10 0.0064
PRO 10GLY 11 0.0020
GLY 11SER 12 -0.0037
SER 12LEU 13 0.0152
LEU 13CGU 14 -0.0006
CGU 14ARG 15 0.0035
ARG 15CGU 16 -0.0016
CGU 16CYS 17 -0.0007
CYS 17LYS 18 0.0020
LYS 18CGU 19 -0.0008
CGU 19CGU 20 -0.0001
CGU 20GLN 21 -0.0014
GLN 21CYS 22 0.0050
CYS 22SER 23 0.0083
SER 23PHE 24 -0.0010
PHE 24CGU 25 -0.0142
CGU 25CGU 26 -0.0013
CGU 26ALA 27 0.0026
ALA 27ARG 28 -0.0012
ARG 28CGU 29 0.0007
CGU 29ILE 30 -0.0015
ILE 30PHE 31 0.0102
PHE 31LYS 32 -0.0036
LYS 32ASP 33 0.0038
ASP 33ALA 34 -0.0030
ALA 34CGU 35 0.0013
CGU 35ARG 36 -0.0014
ARG 36THR 37 -0.0026
THR 37LYS 38 0.0055
LYS 38LEU 39 -0.0114
LEU 39PHE 40 -0.0033
PHE 40TRP 41 0.0006
TRP 41ILE 42 -0.0088
ILE 42SER 43 -0.0480
SER 43TYR 44 0.0261
TYR 44SER 45 -0.0201
SER 45ASP 46 -0.2558
ASP 46GLY 47 0.2563
GLY 47ASP 48 0.1060
ASP 48GLN 49 0.0000
GLN 49CYS 50 -0.0017
CYS 50ALA 51 -0.0039
ALA 51SER 52 -0.0060

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.