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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 30  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 0.2485
ASN 2ALA 3 -0.3163
ALA 3PHE 4 -0.0471
PHE 4LEU 5 -0.1225
LEU 5CGU 6 0.5533
CGU 6CGU 7 0.2254
CGU 7LEU 8 0.3394
LEU 8ARG 9 -0.3326
ARG 9PRO 10 -0.1391
PRO 10GLY 11 -0.6062
GLY 11SER 12 0.0219
SER 12LEU 13 -0.3839
LEU 13CGU 14 -0.6074
CGU 14ARG 15 0.0701
ARG 15CGU 16 -0.0954
CGU 16CYS 17 -0.1852
CYS 17LYS 18 0.1218
LYS 18CGU 19 -0.3759
CGU 19CGU 20 0.3606
CGU 20GLN 21 0.1215
GLN 21CYS 22 0.1289
CYS 22SER 23 0.0333
SER 23PHE 24 -0.4028
PHE 24CGU 25 -0.1259
CGU 25CGU 26 -0.1090
CGU 26ALA 27 0.1155
ALA 27ARG 28 0.0204
ARG 28CGU 29 -0.4075
CGU 29ILE 30 0.3419
ILE 30PHE 31 -0.0370
PHE 31LYS 32 -0.0060
LYS 32ASP 33 -0.1933
ASP 33ALA 34 -0.5196
ALA 34CGU 35 -0.1105
CGU 35ARG 36 0.1530
ARG 36THR 37 0.1856
THR 37LYS 38 -0.2911
LYS 38LEU 39 -0.1178
LEU 39PHE 40 -0.4688
PHE 40TRP 41 0.0606
TRP 41ILE 42 -0.5039
ILE 42SER 43 -0.0680
SER 43TYR 44 0.1239
TYR 44SER 45 -0.3891
SER 45ASP 46 0.5972
ASP 46GLY 47 -0.0428
GLY 47ASP 48 0.3338
ASP 48GLN 49 -0.0442
GLN 49CYS 50 0.2753
CYS 50ALA 51 -0.1694
ALA 51SER 52 0.4817

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.