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***  fvii  ***

CA strain for 22081221180863076

---  normal mode 14  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1ASN 2 0.0318
ASN 2ALA 3 -0.2687
ALA 3PHE 4 0.0934
PHE 4LEU 5 0.0156
LEU 5CGU 6 -0.0924
CGU 6CGU 7 0.1274
CGU 7LEU 8 0.2728
LEU 8ARG 9 -0.1810
ARG 9PRO 10 0.2256
PRO 10GLY 11 0.1853
GLY 11SER 12 0.1211
SER 12LEU 13 -0.0991
LEU 13CGU 14 0.2276
CGU 14ARG 15 -0.1836
ARG 15CGU 16 -0.0951
CGU 16CYS 17 -0.0200
CYS 17LYS 18 -0.0060
LYS 18CGU 19 0.0179
CGU 19CGU 20 -0.0244
CGU 20GLN 21 -0.1834
GLN 21CYS 22 -0.0556
CYS 22SER 23 -0.1242
SER 23PHE 24 -0.4074
PHE 24CGU 25 0.2626
CGU 25CGU 26 -0.0124
CGU 26ALA 27 0.0623
ALA 27ARG 28 -0.0339
ARG 28CGU 29 0.2615
CGU 29ILE 30 -0.1339
ILE 30PHE 31 0.4413
PHE 31LYS 32 -0.0979
LYS 32ASP 33 0.2075
ASP 33ALA 34 0.0093
ALA 34CGU 35 0.0559
CGU 35ARG 36 0.0824
ARG 36THR 37 -0.1367
THR 37LYS 38 0.0353
LYS 38LEU 39 0.1422
LEU 39PHE 40 -0.0465
PHE 40TRP 41 0.0309
TRP 41ILE 42 0.2267
ILE 42SER 43 -0.0055
SER 43TYR 44 -0.0533
TYR 44SER 45 -0.0414
SER 45ASP 46 0.3134
ASP 46GLY 47 -0.3480
GLY 47ASP 48 -0.2221
ASP 48GLN 49 0.0378
GLN 49CYS 50 0.2149
CYS 50ALA 51 0.2909
ALA 51SER 52 -0.0856

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.