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***  proz  ***

CA strain for 22070401545669005

---  normal mode 12  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLY 2 -0.0800
GLY 2SER 3 -0.0001
SER 3TYR 4 -0.2635
TYR 4LEU 5 0.5057
LEU 5LEU 6 0.1270
LEU 6CGU 7 -0.0268
CGU 7CGU 8 0.0973
CGU 8LEU 9 0.2615
LEU 9PHE 10 -0.0130
PHE 10CGU 11 0.2093
CGU 11GLY 12 0.1803
GLY 12ASN 13 0.3907
ASN 13LEU 14 -0.2439
LEU 14CGU 15 0.3384
CGU 15LYS 16 -0.0981
LYS 16CGU 17 -0.1249
CGU 17CYS 18 -0.0805
CYS 18TYR 19 -0.0993
TYR 19CGU 20 0.1630
CGU 20CGU 21 -0.2471
CGU 21ILE 22 -0.1661
ILE 22CYS 23 0.0034
CYS 23VAL 24 -0.1796
VAL 24TYR 25 -0.3092
TYR 25CGU 26 0.2809
CGU 26CGU 27 0.0236
CGU 27ALA 28 0.2312
ALA 28ARG 29 -0.0439
ARG 29CGU 30 0.3027
CGU 30VAL 31 -0.0076
VAL 31PHE 32 0.4096
PHE 32CGU 33 -0.0160
CGU 33ASN 34 0.1723
ASN 34CGU 35 -0.0207
CGU 35VAL 36 0.0647
VAL 36VAL 37 0.0694
VAL 37THR 38 -0.0596
THR 38ASP 39 0.0876
ASP 39CGU 40 0.0136
CGU 40PHE 41 0.1348
PHE 41TRP 42 0.0383
TRP 42ARG 43 0.1014
ARG 43ARG 44 0.1609
ARG 44TYR 45 -0.3287
TYR 45LYS 46 0.0347

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.