CNRS Nantes University UFIP UFIP
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***  1crn  ***

CA strain for 22031613564279271

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
THR 1THR 2 -0.1226
THR 2CYS 3 0.3381
CYS 3CYS 4 -0.0491
CYS 4PRO 5 0.1013
PRO 5SER 6 0.1015
SER 6ILE 7 0.1289
ILE 7VAL 8 -0.0138
VAL 8ALA 9 0.2221
ALA 9ARG 10 -0.1000
ARG 10SER 11 -0.0353
SER 11ASN 12 0.2240
ASN 12PHE 13 0.0118
PHE 13ASN 14 -0.0601
ASN 14VAL 15 0.1450
VAL 15CYS 16 0.1309
CYS 16ARG 17 -0.1793
ARG 17LEU 18 0.0468
LEU 18PRO 19 0.0851
PRO 19GLY 20 0.1322
GLY 20THR 21 -0.1380
THR 21PRO 22 0.0841
PRO 22GLU 23 0.1670
GLU 23ALA 24 0.1780
ALA 24ILE 25 0.0005
ILE 25CYS 26 0.0601
CYS 26ALA 27 -0.2457
ALA 27THR 28 0.0887
THR 28TYR 29 0.0471
TYR 29THR 30 -0.0151
THR 30GLY 31 -0.5513
GLY 31CYS 32 0.3847
CYS 32ILE 33 0.1371
ILE 33ILE 34 0.2190
ILE 34ILE 35 -0.2722
ILE 35PRO 36 0.2112
PRO 36GLY 37 -0.0319
GLY 37ALA 38 -0.0154
ALA 38THR 39 0.0462
THR 39CYS 40 0.0392
CYS 40PRO 41 0.1036
PRO 41GLY 42 0.1460
GLY 42ASP 43 -0.0938
ASP 43TYR 44 0.0776
TYR 44ALA 45 -0.0595
ALA 45ASN 46 0.3277

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.