This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.1308
VAL 2
PHE 3
-0.1083
PHE 3
GLY 4
0.0231
GLY 4
ARG 5
0.0126
ARG 5
CYS 6
-0.0545
CYS 6
GLU 7
-0.0617
GLU 7
LEU 8
0.0243
LEU 8
ALA 9
-0.0668
ALA 9
ALA 10
0.0196
ALA 10
ALA 11
0.0688
ALA 11
MET 12
-0.0416
MET 12
LYS 13
0.0161
LYS 13
ARG 14
-0.0386
ARG 14
HIS 15
0.1181
HIS 15
GLY 16
-0.2473
GLY 16
LEU 17
-0.0125
LEU 17
ASP 18
0.0475
ASP 18
ASN 19
-0.0290
ASN 19
TYR 20
0.1041
TYR 20
ARG 21
-0.0452
ARG 21
GLY 22
0.0706
GLY 22
TYR 23
0.0297
TYR 23
SER 24
-0.0044
SER 24
LEU 25
-0.0387
LEU 25
GLY 26
0.0029
GLY 26
ASN 27
-0.0204
ASN 27
TRP 28
-0.0105
TRP 28
VAL 29
-0.0326
VAL 29
CYS 30
-0.0061
CYS 30
ALA 31
-0.0093
ALA 31
ALA 32
0.0386
ALA 32
LYS 33
-0.0353
LYS 33
PHE 34
0.0074
PHE 34
GLU 35
-0.0572
GLU 35
SER 36
0.2630
SER 36
ASN 37
-0.1694
ASN 37
PHE 38
0.0032
PHE 38
ASN 39
-0.0562
ASN 39
THR 40
0.1545
THR 40
GLN 41
-0.1128
GLN 41
ALA 42
-0.0507
ALA 42
THR 43
-0.3138
THR 43
ASN 44
-0.3192
ASN 44
ARG 45
-0.0289
ARG 45
ASN 46
-0.0208
ASN 46
THR 47
0.0745
THR 47
ASP 48
0.0547
ASP 48
GLY 49
-0.0172
GLY 49
SER 50
0.0770
SER 50
THR 51
-0.1323
THR 51
ASP 52
0.0667
ASP 52
TYR 53
0.0094
TYR 53
GLY 54
-0.0753
GLY 54
ILE 55
-0.1055
ILE 55
LEU 56
0.0488
LEU 56
GLN 57
0.1496
GLN 57
ILE 58
-0.2550
ILE 58
ASN 59
0.0757
ASN 59
SER 60
0.0462
SER 60
ARG 61
-0.0795
ARG 61
TRP 62
0.1830
TRP 62
TRP 63
0.0485
TRP 63
CYS 64
-0.0216
CYS 64
ASN 65
-0.0368
ASN 65
ASP 66
-0.1083
ASP 66
GLY 67
0.0481
GLY 67
ARG 68
-0.0755
ARG 68
THR 69
0.1070
THR 69
PRO 70
-0.0374
PRO 70
GLY 71
0.0308
GLY 71
SER 72
0.0459
SER 72
ARG 73
-0.0005
ARG 73
ASN 74
0.1401
ASN 74
LEU 75
-0.1199
LEU 75
CYS 76
0.2293
CYS 76
ASN 77
-0.0554
ASN 77
ILE 78
0.0774
ILE 78
PRO 79
-0.1048
PRO 79
CYS 80
-0.0018
CYS 80
SER 81
0.0225
SER 81
ALA 82
-0.2214
ALA 82
LEU 83
0.0864
LEU 83
LEU 84
0.0788
LEU 84
SER 85
-0.2656
SER 85
SER 86
0.1896
SER 86
ASP 87
-0.0369
ASP 87
ILE 88
0.0323
ILE 88
THR 89
0.0350
THR 89
ALA 90
0.0717
ALA 90
SER 91
0.0441
SER 91
VAL 92
-0.0634
VAL 92
ASN 93
0.1122
ASN 93
CYS 94
0.2420
CYS 94
ALA 95
-0.0790
ALA 95
LYS 96
0.0249
LYS 96
LYS 97
0.1983
LYS 97
ILE 98
-0.2576
ILE 98
VAL 99
0.1416
VAL 99
SER 100
-0.0083
SER 100
ASP 101
0.2006
ASP 101
GLY 102
0.0442
GLY 102
ASN 103
0.0139
ASN 103
GLY 104
-0.0248
GLY 104
MET 105
-0.0156
MET 105
ASN 106
-0.0176
ASN 106
ALA 107
-0.1145
ALA 107
TRP 108
0.0148
TRP 108
VAL 109
-0.1265
VAL 109
ALA 110
-0.0188
ALA 110
TRP 111
0.0276
TRP 111
ARG 112
0.0405
ARG 112
ASN 113
-0.0657
ASN 113
ARG 114
-0.0153
ARG 114
CYS 115
-0.0019
CYS 115
LYS 116
0.0260
LYS 116
GLY 117
-0.0177
GLY 117
THR 118
0.0040
THR 118
ASP 119
-0.0486
ASP 119
VAL 120
0.0124
VAL 120
GLN 121
-0.0136
GLN 121
ALA 122
0.0402
ALA 122
TRP 123
0.0179
TRP 123
ILE 124
-0.0629
ILE 124
ARG 125
0.0718
ARG 125
GLY 126
-0.0980
GLY 126
CYS 127
0.0961
CYS 127
ARG 128
-0.1398
ARG 128
LEU 129
-0.0522
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.