This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
PRO 2
SER 3
0.0273
SER 3
GLU 4
0.0067
GLU 4
LEU 5
-0.0139
LEU 5
THR 6
0.0619
THR 6
PRO 7
-0.0141
PRO 7
GLU 8
-0.0041
GLU 8
GLU 9
0.0002
GLU 9
ARG 10
-0.0110
ARG 10
SER 11
-0.0006
SER 11
GLU 12
-0.0195
GLU 12
LEU 13
-0.0086
LEU 13
LYS 14
-0.0015
LYS 14
ASN 15
-0.0012
ASN 15
SER 16
0.0142
SER 16
ILE 17
-0.0196
ILE 17
ALA 18
0.0333
ALA 18
GLU 19
0.0053
GLU 19
PHE 20
-0.0427
PHE 20
HIS 21
0.0686
HIS 21
THR 22
-0.0569
THR 22
TYR 23
-0.0900
TYR 23
GLN 24
0.0527
GLN 24
LEU 25
0.0145
LEU 25
ASP 26
0.0756
ASP 26
PRO 27
-0.0497
PRO 27
GLY 28
0.0097
GLY 28
SER 29
0.0251
SER 29
CYS 30
-0.0160
CYS 30
SER 31
-0.0395
SER 31
SER 32
-0.1647
SER 32
LEU 33
0.0924
LEU 33
HIS 34
-0.0599
HIS 34
ALA 35
0.1377
ALA 35
GLN 36
0.0085
GLN 36
ARG 37
0.0997
ARG 37
ILE 38
-0.0696
ILE 38
HIS 39
0.0638
HIS 39
ALA 40
-0.0799
ALA 40
PRO 41
0.0420
PRO 41
PRO 42
0.0026
PRO 42
GLU 43
-0.0095
GLU 43
LEU 44
0.0091
LEU 44
VAL 45
0.0276
VAL 45
TRP 46
-0.0244
TRP 46
SER 47
0.0381
SER 47
ILE 48
0.0193
ILE 48
VAL 49
0.0007
VAL 49
ARG 50
0.0119
ARG 50
ARG 51
0.0482
ARG 51
PHE 52
-0.0379
PHE 52
ASP 53
0.0279
ASP 53
LYS 54
-0.1274
LYS 54
PRO 55
-0.0243
PRO 55
GLN 56
0.0357
GLN 56
THR 57
0.0658
THR 57
TYR 58
-0.0681
TYR 58
LYS 59
0.0804
LYS 59
HIS 60
0.0429
HIS 60
PHE 61
0.1970
PHE 61
ILE 62
-0.1108
ILE 62
LYS 63
0.0348
LYS 63
SER 64
-0.0567
SER 64
CYS 65
-0.0514
CYS 65
SER 66
-0.1033
SER 66
VAL 67
-0.0816
VAL 67
GLU 68
-0.0893
GLU 68
GLN 69
0.1799
GLN 69
ASN 70
0.0136
ASN 70
ASN 70
0.0003
ASN 70
PHE 71
-0.0136
PHE 71
PHE 71
0.0022
PHE 71
GLU 72
-0.0629
GLU 72
MET 73
-0.0562
MET 73
MET 73
-0.0021
MET 73
ARG 74
-0.0725
ARG 74
VAL 75
0.1560
VAL 75
GLY 76
-0.0759
GLY 76
CYS 77
0.1865
CYS 77
THR 78
-0.1638
THR 78
ARG 79
-0.0536
ARG 79
ASP 80
-0.0478
ASP 80
VAL 81
0.0166
VAL 81
ILE 82
-0.0134
ILE 82
VAL 83
-0.0491
VAL 83
ILE 84
0.0075
ILE 84
SER 85
0.0298
SER 85
GLY 86
-0.0085
GLY 86
LEU 87
-0.0044
LEU 87
PRO 88
0.0919
PRO 88
ALA 89
-0.0215
ALA 89
ASN 90
-0.0512
ASN 90
THR 91
-0.0238
THR 91
SER 92
-0.0167
SER 92
THR 93
-0.0150
THR 93
GLU 94
-0.0705
GLU 94
ARG 95
-0.0793
ARG 95
LEU 96
-0.1037
LEU 96
ASP 97
0.0540
ASP 97
ILE 98
-0.1054
ILE 98
LEU 99
-0.0087
LEU 99
ASP 100
-0.0414
ASP 100
ASP 101
-0.0098
ASP 101
GLU 102
0.0162
GLU 102
ARG 103
0.0110
ARG 103
ARG 104
0.0446
ARG 104
VAL 105
-0.0742
VAL 105
THR 106
-0.0396
THR 106
GLY 107
-0.0655
GLY 107
PHE 108
-0.0889
PHE 108
SER 109
-0.0691
SER 109
ILE 110
-0.0949
ILE 110
ILE 111
-0.0109
ILE 111
GLY 112
-0.0227
GLY 112
GLY 113
-0.0048
GLY 113
GLU 114
-0.0372
GLU 114
HIS 115
0.0049
HIS 115
ARG 116
-0.0765
ARG 116
LEU 117
-0.0129
LEU 117
THR 118
0.0865
THR 118
ASN 119
-0.0841
ASN 119
TYR 120
-0.0200
TYR 120
LYS 121
-0.1012
LYS 121
SER 122
-0.0940
SER 122
VAL 123
-0.1075
VAL 123
THR 124
0.0053
THR 124
THR 125
-0.0283
THR 125
VAL 126
0.0120
VAL 126
HIS 127
-0.0764
HIS 127
ARG 128
-0.0633
ARG 128
PHE 129
-0.0487
PHE 129
GLU 130
-0.0709
GLU 130
LYS 131
-0.0782
LYS 131
GLU 132
0.0960
GLU 132
ASN 133
0.0391
ASN 133
ARG 134
-0.0066
ARG 134
ILE 135
-0.0910
ILE 135
TRP 136
0.0460
TRP 136
THR 137
0.0063
THR 137
VAL 138
-0.0017
VAL 138
VAL 139
0.0400
VAL 139
LEU 140
-0.0073
LEU 140
GLU 141
0.0397
GLU 141
SER 142
0.0049
SER 142
TYR 143
-0.0383
TYR 143
VAL 144
-0.0167
VAL 144
VAL 145
-0.0137
VAL 145
ASP 146
-0.0257
ASP 146
MET 147
0.0099
MET 147
PRO 148
-0.0426
PRO 148
GLU 149
-0.0595
GLU 149
GLY 150
-0.0102
GLY 150
ASN 151
0.0032
ASN 151
SER 152
-0.0164
SER 152
GLU 153
0.0329
GLU 153
ASP 154
-0.0236
ASP 154
ASP 155
-0.0082
ASP 155
THR 156
-0.0092
THR 156
ARG 157
0.0064
ARG 157
ARG 157
0.0028
ARG 157
MET 158
-0.0454
MET 158
PHE 159
-0.0863
PHE 159
ALA 160
-0.0152
ALA 160
ASP 161
0.0721
ASP 161
THR 162
-0.1085
THR 162
VAL 163
-0.0684
VAL 163
VAL 164
0.0179
VAL 164
LYS 165
0.0336
LYS 165
LYS 165
-0.0393
LYS 165
LEU 166
-0.0223
LEU 166
ASN 167
-0.0286
ASN 167
LEU 168
0.0673
LEU 168
GLN 169
-0.0258
GLN 169
GLN 169
0.0061
GLN 169
LYS 170
-0.0196
LYS 170
LEU 171
0.0353
LEU 171
ALA 172
0.0229
ALA 172
THR 173
-0.0059
THR 173
THR 173
-0.0147
THR 173
VAL 174
-0.0171
VAL 174
ALA 175
0.0295
ALA 175
GLU 176
-0.0256
GLU 176
ALA 177
-0.0009
ALA 177
MET 178
-0.0145
MET 178
ALA 179
-0.0041
ALA 179
ARG 180
-0.0403
ARG 180
ASN 181
-0.0385
ASN 181
SER 182
-0.0165
SER 182
GLY 183
-0.0304
GLY 183
ASP 184
-0.0479
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.