CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  OXYGEN TRANSPORT 13-DEC-97 101M  ***

CA strain for 211108160546133634

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0VAL 1 -0.0126
VAL 1LEU 2 0.0163
LEU 2SER 3 -0.0752
SER 3GLU 4 -0.0311
GLU 4GLY 5 0.0545
GLY 5GLU 6 -0.0799
GLU 6TRP 7 0.0608
TRP 7GLN 8 -0.0578
GLN 8LEU 9 0.0001
LEU 9VAL 10 0.1066
VAL 10LEU 11 -0.0429
LEU 11HIS 12 -0.0015
HIS 12VAL 13 -0.1102
VAL 13TRP 14 0.1416
TRP 14ALA 15 -0.0512
ALA 15LYS 16 -0.0814
LYS 16VAL 17 0.1271
VAL 17GLU 18 -0.1219
GLU 18ALA 19 -0.0582
ALA 19ASP 20 0.1042
ASP 20VAL 21 0.0120
VAL 21ALA 22 0.2982
ALA 22GLY 23 -0.0716
GLY 23HIS 24 0.2588
HIS 24GLY 25 0.2548
GLY 25GLN 26 0.0426
GLN 26ASP 27 0.1878
ASP 27ILE 28 0.0400
ILE 28LEU 29 0.0117
LEU 29ILE 30 0.0034
ILE 30ARG 31 0.1151
ARG 31LEU 32 -0.0208
LEU 32PHE 33 -0.0718
PHE 33LYS 34 0.0044
LYS 34SER 35 0.1617
SER 35HIS 36 -0.0548
HIS 36PRO 37 -0.0823
PRO 37GLU 38 0.0751
GLU 38THR 39 -0.0139
THR 39LEU 40 -0.2821
LEU 40GLU 41 0.0842
GLU 41LYS 42 0.2469
LYS 42PHE 43 -0.5303
PHE 43ASP 44 0.1298
ASP 44ARG 45 -0.0305
ARG 45VAL 46 -0.0387
VAL 46LYS 47 0.1161
LYS 47HIS 48 -0.1338
HIS 48LEU 49 0.0390
LEU 49LYS 50 0.1699
LYS 50THR 51 -0.0445
THR 51GLU 52 -0.0852
GLU 52ALA 53 0.0359
ALA 53GLU 54 -0.0184
GLU 54MET 55 0.1510
MET 55LYS 56 -0.0589
LYS 56ALA 57 0.0265
ALA 57SER 58 -0.1504
SER 58GLU 59 0.0326
GLU 59ASP 60 -0.0945
ASP 60LEU 61 -0.0425
LEU 61LYS 62 0.1229
LYS 62LYS 63 0.0084
LYS 63HIS 64 -0.0122
HIS 64GLY 65 0.2834
GLY 65VAL 66 -0.1402
VAL 66THR 67 0.0353
THR 67VAL 68 -0.1183
VAL 68LEU 69 0.0619
LEU 69THR 70 -0.1085
THR 70ALA 71 0.2635
ALA 71LEU 72 -0.1187
LEU 72GLY 73 -0.0233
GLY 73ALA 74 0.1782
ALA 74ILE 75 -0.0399
ILE 75LEU 76 0.2513
LEU 76LYS 77 -0.1115
LYS 77LYS 78 0.0710
LYS 78LYS 79 0.1298
LYS 79GLY 80 -0.0253
GLY 80HIS 81 0.0272
HIS 81HIS 82 0.0776
HIS 82GLU 83 0.1077
GLU 83ALA 84 -0.0660
ALA 84GLU 85 0.2971
GLU 85LEU 86 0.1554
LEU 86LYS 87 -0.0680
LYS 87PRO 88 -0.0972
PRO 88LEU 89 0.1267
LEU 89ALA 90 0.1468
ALA 90GLN 91 -0.2264
GLN 91SER 92 0.0947
SER 92HIS 93 0.0284
HIS 93ALA 94 0.0016
ALA 94THR 95 -0.0407
THR 95LYS 96 0.1071
LYS 96HIS 97 0.2087
HIS 97LYS 98 -0.0803
LYS 98ILE 99 -0.0026
ILE 99PRO 100 0.0268
PRO 100ILE 101 -0.1405
ILE 101LYS 102 -0.1004
LYS 102TYR 103 -0.0687
TYR 103LEU 104 0.0562
LEU 104GLU 105 0.1509
GLU 105PHE 106 0.0442
PHE 106ILE 107 -0.0523
ILE 107SER 108 -0.0195
SER 108GLU 109 0.2904
GLU 109ALA 110 0.0491
ALA 110ILE 111 0.0174
ILE 111ILE 112 0.0581
ILE 112HIS 113 0.2472
HIS 113VAL 114 -0.0860
VAL 114LEU 115 0.0576
LEU 115HIS 116 0.0815
HIS 116SER 117 0.1119
SER 117ARG 118 0.0351
ARG 118HIS 119 0.1526
HIS 119PRO 120 0.1545
PRO 120GLY 121 -0.1162
GLY 121ASN 122 -0.0238
ASN 122PHE 123 -0.1130
PHE 123GLY 124 0.0782
GLY 124ALA 125 0.1917
ALA 125ASP 126 0.0957
ASP 126ALA 127 0.0894
ALA 127GLN 128 -0.0037
GLN 128GLY 129 0.1166
GLY 129ALA 130 0.0940
ALA 130MET 131 0.0472
MET 131ASN 132 -0.0445
ASN 132LYS 133 0.2060
LYS 133ALA 134 0.0310
ALA 134LEU 135 -0.0594
LEU 135GLU 136 0.1974
GLU 136LEU 137 0.0536
LEU 137PHE 138 -0.0349
PHE 138ARG 139 -0.0561
ARG 139LYS 140 0.1635
LYS 140ASP 141 0.0567
ASP 141ILE 142 -0.0935
ILE 142ALA 143 0.0876
ALA 143ALA 144 -0.0465
ALA 144LYS 145 -0.0016
LYS 145TYR 146 0.1839
TYR 146LYS 147 0.0434
LYS 147GLU 148 -0.0889
GLU 148LEU 149 0.1855
LEU 149GLY 150 0.1185
GLY 150TYR 151 -0.1261
TYR 151GLN 152 0.0822
GLN 152GLY 153 -0.1642

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.