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***  MEMBRANE PROTEIN 03-OCT-98 1BXW  ***

CA strain for 21110813374362683

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ALA 1 -0.0042
ALA 1PRO 2 -0.0041
PRO 2LYS 3 0.0008
LYS 3ASP 4 0.0020
ASP 4ASN 5 0.0009
ASN 5THR 6 0.0009
THR 6TRP 7 -0.0009
TRP 7TYR 8 0.0030
TYR 8THR 9 0.0008
THR 9GLY 10 0.0086
GLY 10ALA 11 0.0176
ALA 11LYS 12 0.0144
LYS 12LEU 13 0.0393
LEU 13GLY 14 0.0033
GLY 14TRP 15 0.0298
TRP 15SER 16 -0.0126
SER 16GLN 17 0.0114
GLN 17TYR 18 0.0287
TYR 18HIS 19 -0.0155
HIS 19ASP 20 -0.0647
ASP 20THR 21 -0.1463
THR 21GLY 22 0.0119
GLY 22LEU 23 -0.1259
LEU 23ILE 24 -0.0191
ILE 24ASN 25 -0.0267
ASN 25ASN 26 -0.0023
ASN 26ASN 27 0.0570
ASN 27GLY 28 -0.0945
GLY 28PRO 29 0.0045
PRO 29THR 30 -0.1080
THR 30HIS 31 0.1072
HIS 31GLU 32 0.0335
GLU 32ASN 33 0.0816
ASN 33LYS 34 0.0235
LYS 34LEU 35 0.0011
LEU 35GLY 36 0.0459
GLY 36ALA 37 0.0372
ALA 37GLY 38 0.0185
GLY 38ALA 39 0.0112
ALA 39PHE 40 -0.0174
PHE 40GLY 41 -0.0050
GLY 41GLY 42 -0.0046
GLY 42TYR 43 -0.0074
TYR 43GLN 44 -0.0047
GLN 44VAL 45 0.0006
VAL 45ASN 46 -0.0019
ASN 46PRO 47 0.0001
PRO 47TYR 48 0.0045
TYR 48VAL 49 -0.0073
VAL 49GLY 50 -0.0063
GLY 50PHE 51 -0.0110
PHE 51GLU 52 -0.0050
GLU 52MET 53 -0.0156
MET 53GLY 54 -0.0082
GLY 54TYR 55 -0.0340
TYR 55ASP 56 -0.0048
ASP 56TRP 57 0.0020
TRP 57LEU 58 -0.0017
LEU 58GLY 59 0.0356
GLY 59ARG 60 0.0225
ARG 60MET 61 0.0096
MET 61PRO 62 0.0520
PRO 62TYR 63 0.0132
TYR 63LYS 64 0.0431
LYS 64GLY 65 0.0027
GLY 65SER 66 0.0169
SER 66VAL 67 -0.0122
VAL 67GLU 68 0.0110
GLU 68ASN 69 -0.0140
ASN 69GLY 70 -0.0339
GLY 70ALA 71 -0.0161
ALA 71TYR 72 -0.0034
TYR 72LYS 73 -0.0343
LYS 73ALA 74 -0.0104
ALA 74GLN 75 -0.0312
GLN 75GLY 76 -0.0171
GLY 76VAL 77 -0.0285
VAL 77GLN 78 -0.0084
GLN 78LEU 79 -0.0047
LEU 79THR 80 -0.0035
THR 80ALA 81 -0.0022
ALA 81LYS 82 0.0035
LYS 82LEU 83 -0.0077
LEU 83GLY 84 -0.0002
GLY 84TYR 85 0.0003
TYR 85PRO 86 0.0015
PRO 86ILE 87 -0.0025
ILE 87THR 88 0.0015
THR 88ASP 89 -0.0009
ASP 89ASP 90 0.0006
ASP 90LEU 91 0.0055
LEU 91ASP 92 0.0025
ASP 92ILE 93 0.0035
ILE 93TYR 94 0.0056
TYR 94THR 95 0.0126
THR 95ARG 96 -0.0007
ARG 96LEU 97 0.0031
LEU 97GLY 98 0.0198
GLY 98GLY 99 0.0052
GLY 99MET 100 0.0025
MET 100VAL 101 -0.0253
VAL 101TRP 102 -0.0165
TRP 102ARG 103 -0.0214
ARG 103ALA 104 -0.0255
ALA 104ASP 105 -0.0485
ASP 105THR 106 -0.0160
THR 106TYR 107 -0.0045
TYR 107SER 108 0.0268
SER 108ASN 109 -0.0211
ASN 109VAL 110 -0.0054
VAL 110TYR 111 0.0147
TYR 111GLY 112 -0.0633
GLY 112LYS 113 -0.0368
LYS 113ASN 114 0.0529
ASN 114HIS 115 0.0006
HIS 115ASP 116 -0.0058
ASP 116THR 117 -0.0050
THR 117GLY 118 0.0452
GLY 118VAL 119 0.0093
VAL 119SER 120 -0.0240
SER 120PRO 121 0.0228
PRO 121VAL 122 0.0407
VAL 122PHE 123 0.0078
PHE 123ALA 124 0.0291
ALA 124GLY 125 0.0061
GLY 125GLY 126 0.0201
GLY 126VAL 127 0.0210
VAL 127GLU 128 0.0082
GLU 128TYR 129 0.0053
TYR 129ALA 130 0.0086
ALA 130ILE 131 -0.0004
ILE 131THR 132 0.0030
THR 132PRO 133 0.0010
PRO 133GLU 134 -0.0031
GLU 134ILE 135 0.0062
ILE 135ALA 136 0.0098
ALA 136THR 137 0.0221
THR 137ARG 138 0.0140
ARG 138LEU 139 0.0151
LEU 139GLU 140 0.0023
GLU 140TYR 141 0.0073
TYR 141GLN 142 -0.0064
GLN 142TRP 143 0.0132
TRP 143THR 144 0.0157
THR 144ASN 145 0.0295
ASN 145ASN 146 -0.0016
ASN 146ILE 147 -0.0116
ILE 147GLY 148 -0.0022
GLY 148ASP 149 0.0163
ASP 149ALA 150 0.0480
ALA 150HIS 151 0.0175
HIS 151THR 152 0.0123
THR 152ILE 153 0.0014
ILE 153GLY 154 0.0365
GLY 154THR 155 0.0648
THR 155ARG 156 0.0865
ARG 156PRO 157 -0.1850
PRO 157ASP 158 -0.0262
ASP 158ASN 159 0.0028
ASN 159GLY 160 -0.0630
GLY 160MET 161 -0.0183
MET 161LEU 162 -0.0188
LEU 162SER 163 -0.0053
SER 163LEU 164 0.0038
LEU 164GLY 165 0.0294
GLY 165VAL 166 0.0259
VAL 166SER 167 0.0156
SER 167TYR 168 0.0149
TYR 168ARG 169 0.0019
ARG 169PHE 170 0.0042
PHE 170GLY 171 -0.0024

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.