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***  MEMBRANE PROTEIN 03-OCT-98 1BXW  ***

CA strain for 21110813374362683

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
MET 0ALA 1 -0.0030
ALA 1PRO 2 0.0061
PRO 2LYS 3 0.0047
LYS 3ASP 4 -0.0009
ASP 4ASN 5 0.0017
ASN 5THR 6 0.0146
THR 6TRP 7 0.0208
TRP 7TYR 8 0.0279
TYR 8THR 9 0.0337
THR 9GLY 10 0.0477
GLY 10ALA 11 0.0782
ALA 11LYS 12 0.0375
LYS 12LEU 13 0.0534
LEU 13GLY 14 0.0121
GLY 14TRP 15 0.0145
TRP 15SER 16 0.0440
SER 16GLN 17 -0.0118
GLN 17TYR 18 0.0367
TYR 18HIS 19 -0.0105
HIS 19ASP 20 -0.0289
ASP 20THR 21 -0.1432
THR 21GLY 22 -0.0351
GLY 22LEU 23 -0.1540
LEU 23ILE 24 -0.0154
ILE 24ASN 25 -0.0469
ASN 25ASN 26 -0.0145
ASN 26ASN 27 0.0696
ASN 27GLY 28 -0.1692
GLY 28PRO 29 -0.1515
PRO 29THR 30 -0.1702
THR 30HIS 31 0.0362
HIS 31GLU 32 0.0832
GLU 32ASN 33 0.0811
ASN 33LYS 34 0.0106
LYS 34LEU 35 0.0209
LEU 35GLY 36 0.0689
GLY 36ALA 37 0.0855
ALA 37GLY 38 0.0568
GLY 38ALA 39 0.0611
ALA 39PHE 40 0.1025
PHE 40GLY 41 0.0628
GLY 41GLY 42 0.0610
GLY 42TYR 43 0.0552
TYR 43GLN 44 0.0100
GLN 44VAL 45 0.0136
VAL 45ASN 46 0.0097
ASN 46PRO 47 0.0048
PRO 47TYR 48 -0.0175
TYR 48VAL 49 0.0283
VAL 49GLY 50 0.0263
GLY 50PHE 51 0.0349
PHE 51GLU 52 0.0538
GLU 52MET 53 0.0615
MET 53GLY 54 0.0596
GLY 54TYR 55 0.1226
TYR 55ASP 56 0.0381
ASP 56TRP 57 0.0607
TRP 57LEU 58 0.0514
LEU 58GLY 59 0.0837
GLY 59ARG 60 0.0915
ARG 60MET 61 0.0025
MET 61PRO 62 0.0576
PRO 62TYR 63 0.0753
TYR 63LYS 64 -0.0447
LYS 64GLY 65 -0.0741
GLY 65SER 66 -0.0764
SER 66VAL 67 0.0883
VAL 67GLU 68 0.0874
GLU 68ASN 69 -0.0275
ASN 69GLY 70 0.0085
GLY 70ALA 71 0.0466
ALA 71TYR 72 0.0591
TYR 72LYS 73 0.0930
LYS 73ALA 74 0.0399
ALA 74GLN 75 0.0464
GLN 75GLY 76 0.0638
GLY 76VAL 77 0.0533
VAL 77GLN 78 0.0252
GLN 78LEU 79 0.0358
LEU 79THR 80 0.0203
THR 80ALA 81 0.0261
ALA 81LYS 82 -0.0018
LYS 82LEU 83 0.0353
LEU 83GLY 84 0.0094
GLY 84TYR 85 0.0061
TYR 85PRO 86 -0.0059
PRO 86ILE 87 0.0064
ILE 87THR 88 -0.0002
THR 88ASP 89 0.0022
ASP 89ASP 90 0.0013
ASP 90LEU 91 -0.0053
LEU 91ASP 92 -0.0036
ASP 92ILE 93 -0.0077
ILE 93TYR 94 0.0041
TYR 94THR 95 -0.0028
THR 95ARG 96 0.0286
ARG 96LEU 97 0.0213
LEU 97GLY 98 0.0031
GLY 98GLY 99 0.0095
GLY 99MET 100 -0.0142
MET 100VAL 101 0.0281
VAL 101TRP 102 0.0088
TRP 102ARG 103 0.0561
ARG 103ALA 104 0.0018
ALA 104ASP 105 0.0648
ASP 105THR 106 0.0061
THR 106TYR 107 -0.0071
TYR 107SER 108 -0.0202
SER 108ASN 109 0.0219
ASN 109VAL 110 0.0188
VAL 110TYR 111 -0.0527
TYR 111GLY 112 0.0270
GLY 112LYS 113 0.0684
LYS 113ASN 114 -0.1108
ASN 114HIS 115 -0.1026
HIS 115ASP 116 -0.0750
ASP 116THR 117 -0.0827
THR 117GLY 118 -0.0689
GLY 118VAL 119 -0.0588
VAL 119SER 120 0.0059
SER 120PRO 121 -0.0197
PRO 121VAL 122 -0.0036
VAL 122PHE 123 0.0144
PHE 123ALA 124 0.0109
ALA 124GLY 125 0.0211
GLY 125GLY 126 -0.0038
GLY 126VAL 127 -0.0060
VAL 127GLU 128 -0.0111
GLU 128TYR 129 -0.0079
TYR 129ALA 130 -0.0041
ALA 130ILE 131 -0.0047
ILE 131THR 132 -0.0001
THR 132PRO 133 -0.0049
PRO 133GLU 134 0.0028
GLU 134ILE 135 0.0067
ILE 135ALA 136 -0.0064
ALA 136THR 137 0.0071
THR 137ARG 138 0.0039
ARG 138LEU 139 -0.0076
LEU 139GLU 140 0.0071
GLU 140TYR 141 0.0037
TYR 141GLN 142 0.0018
GLN 142TRP 143 0.0268
TRP 143THR 144 0.0242
THR 144ASN 145 0.0221
ASN 145ASN 146 -0.0256
ASN 146ILE 147 -0.0121
ILE 147GLY 148 0.0035
GLY 148ASP 149 0.0595
ASP 149ALA 150 -0.0144
ALA 150HIS 151 0.0041
HIS 151THR 152 -0.0050
THR 152ILE 153 -0.0059
ILE 153GLY 154 -0.0304
GLY 154THR 155 -0.0347
THR 155ARG 156 -0.0456
ARG 156PRO 157 0.0201
PRO 157ASP 158 0.0086
ASP 158ASN 159 0.0258
ASN 159GLY 160 0.0146
GLY 160MET 161 0.0190
MET 161LEU 162 0.0125
LEU 162SER 163 0.0164
SER 163LEU 164 0.0222
LEU 164GLY 165 0.0138
GLY 165VAL 166 0.0376
VAL 166SER 167 0.0223
SER 167TYR 168 0.0177
TYR 168ARG 169 0.0163
ARG 169PHE 170 0.0005
PHE 170GLY 171 0.0158

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.