Should you encounter any unexpected behaviour,
please let us know.

* TRANSCRIPTION/DNA 14-DEC-09 3L1P *

B-factor analysis for ID 2404121828463868023

Overall B-factor prediction

Correlation= 0.540 for 292 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA ASP 1 0.9363 248.4966 129.5900
7 CA MET 2 0.6408 190.8662 120.3200
12 CA LYS 3 0.3723 138.4938 118.2600
17 CA ALA 4 0.2839 121.2427 118.7300
22 CA LEU 5 0.1296 91.1634 108.6100
27 CA GLN 6 0.1029 85.9577 103.0400
32 CA LYS 7 0.1040 86.1613 106.4200
37 CA GLU 8 0.0761 80.7333 101.8100
46 CA LEU 9 0.0406 73.8032 92.0700
54 CA GLU 10 0.0482 75.2734 89.9100
60 CA GLN 11 0.0524 76.1104 90.4900
66 CA PHE 12 0.0337 72.4488 84.1500
77 CA ALA 13 0.0252 70.8023 77.5300
82 CA LYS 14 0.0338 72.4834 78.3300
88 CA LEU 15 0.0303 71.7905 77.1300
96 CA LEU 16 0.0209 69.9630 70.5300
104 CA LYS 17 0.0205 69.8854 66.2300
113 CA GLN 18 0.0251 70.7800 68.1200
118 CA LYS 19 0.0245 70.6550 66.6200
124 CA ARG 20 0.0188 69.5576 61.4400
135 CA ILE 21 0.0216 70.1014 60.4700
143 CA THR 22 0.0325 72.2143 62.3200
150 CA LEU 23 0.0333 72.3793 61.1200
158 CA GLY 24 0.0300 71.7333 55.6100
162 CA TYR 25 0.0198 69.7509 53.8500
174 CA THR 26 0.0164 69.0800 48.4900
181 CA GLN 27 0.0128 68.3707 45.1000
190 CA ALA 28 0.0145 68.7006 44.9900
195 CA ASP 29 0.0176 69.3136 48.5200
203 CA VAL 30 0.0152 68.8506 50.0300
210 CA GLY 31 0.0152 68.8550 51.0500
214 CA LEU 32 0.0193 69.6518 54.9500
222 CA THR 33 0.0227 70.3132 59.2100
229 CA LEU 34 0.0221 70.2012 59.5000
237 CA GLY 35 0.0288 71.4926 61.3900
241 CA VAL 36 0.0342 72.5460 64.9600
248 CA LEU 37 0.0366 73.0122 66.2800
256 CA PHE 38 0.0399 73.6711 65.9000
267 CA GLY 39 0.0436 74.3914 64.1900
271 CA LYS 40 0.0313 71.9915 57.4900
277 CA VAL 41 0.0200 69.7778 51.8800
284 CA PHE 42 0.0151 68.8314 46.1000
295 CA SER 43 0.0119 68.2054 42.3300
301 CA GLN 44 0.0113 68.0941 40.8900
310 CA THR 45 0.0118 68.1801 40.0800
317 CA THR 46 0.0116 68.1533 42.1600
324 CA ILE 47 0.0119 68.1933 44.4300
332 CA SER 48 0.0125 68.3225 46.7900
338 CA ARG 49 0.0140 68.6068 50.5100
349 CA PHE 50 0.0144 68.6855 54.0800
360 CA GLU 51 0.0157 68.9495 56.5100
369 CA ALA 52 0.0213 70.0353 60.4700
374 CA LEU 53 0.0255 70.8464 65.0500
382 CA GLN 54 0.0257 70.8850 63.1900
391 CA LEU 55 0.0235 70.4618 61.9100
399 CA SER 56 0.0319 72.1099 65.6600
405 CA LEU 57 0.0497 75.5829 71.5900
413 CA LYS 58 0.0445 74.5636 71.3500
419 CA ASN 59 0.0250 70.7547 66.3100
427 CA MET 60 0.0221 70.1826 68.1900
435 CA SER 61 0.0318 72.0796 73.7100
441 CA LYS 62 0.0322 72.1596 71.9300
447 CA LEU 63 0.0217 70.1054 68.7700
455 CA ARG 64 0.0232 70.4131 72.9600
466 CA PRO 65 0.0301 71.7482 77.1000
473 CA LEU 66 0.0260 70.9547 72.4400
481 CA LEU 67 0.0204 69.8594 70.4200
489 CA GLU 68 0.0269 71.1353 76.6800
494 CA LYS 69 0.0312 71.9732 78.9200
500 CA TRP 70 0.0241 70.5782 74.6000
514 CA VAL 71 0.0276 71.2608 78.6700
521 CA GLU 72 0.0414 73.9531 87.8700
526 CA GLU 73 0.0411 73.8913 89.2900
535 CA ALA 74 0.0351 72.7251 87.3300
540 CA ASP 75 0.0557 76.7386 93.7700
548 CA ASN 76 0.0850 82.4508 99.9500
556 CA ASN 77 0.0715 79.8360 101.2600
564 CA GLU 78 0.0580 77.1957 96.5200
570 CA ASN 79 0.1222 89.7217 100.6400
575 CA LEU 80 0.1084 87.0245 104.9300
583 CA GLN 81 0.0447 74.6095 100.2100
592 CA GLU 82 0.0545 76.5074 98.9200
597 CA ILE 83 0.0907 83.5751 106.0000
602 CA SER 84 0.0900 83.4279 107.3000
607 CA LYS 85 0.0595 77.4942 104.0500
612 CA SER 86 0.0605 77.6825 101.0000
617 CA VAL 90 0.1038 86.1327 107.3500
624 CA GLN 91 0.0941 84.2395 102.3400
629 CA ALA 92 0.0702 79.5669 99.5000
634 CA ARG 93 0.0829 82.0409 97.4500
645 CA LYS 94 0.0450 74.6546 89.9500
650 CA ARG 95 0.0293 71.5906 84.6900
656 CA LYS 96 0.0188 69.5434 82.0200
661 CA ARG 97 0.0143 68.6802 76.3300
672 CA THR 98 0.0193 69.6365 76.3800
679 CA SER 99 0.0202 69.8285 75.8600
685 CA ILE 100 0.0332 72.3532 79.1800
693 CA GLU 101 0.0598 77.5358 82.6800
698 CA ASN 102 0.1465 94.4490 83.4800
703 CA ARG 103 0.1543 95.9803 88.2400
708 CA VAL 104 0.0712 79.7639 84.9500
715 CA ARG 105 0.0567 76.9476 81.0700
720 CA TRP 106 0.1027 85.9046 87.4200
734 CA SER 107 0.1015 85.6806 91.6800
740 CA LEU 108 0.0582 77.2237 86.4600
748 CA GLU 109 0.0736 80.2295 87.0100
757 CA THR 110 0.1142 88.1558 93.3300
764 CA MET 111 0.0944 84.3021 92.0200
770 CA PHE 112 0.0958 84.5698 91.1300
781 CA LEU 113 0.1324 91.7133 94.6400
789 CA LYS 114 0.1529 95.6927 97.1400
795 CA SER 115 0.1128 87.8845 93.0600
801 CA PRO 116 0.0765 80.7963 89.4900
808 CA LYS 117 0.0710 79.7278 89.6400
817 CA PRO 118 0.0802 81.5208 92.9600
824 CA SER 119 0.1027 85.9096 94.9200
829 CA LEU 120 0.1333 91.8715 98.5600
834 CA GLN 121 0.1522 95.5701 103.7000
839 CA GLN 122 0.1068 86.7185 102.1300
848 CA ILE 123 0.0815 81.7757 98.2800
853 CA THR 124 0.1292 91.0790 103.7400
858 CA HIS 125 0.1459 94.3407 106.8400
863 CA ILE 126 0.0930 84.0206 101.5000
871 CA ALA 127 0.0850 82.4692 99.7100
876 CA ASN 128 0.1450 94.1710 106.2400
881 CA GLN 129 0.1625 97.5654 106.8500
890 CA LEU 130 0.1094 87.2250 99.4500
898 CA GLY 131 0.1219 89.6590 99.4200
902 CA LEU 132 0.0781 81.1151 91.9100
910 CA GLU 133 0.0870 82.8435 90.4000
919 CA LYS 134 0.0739 80.3027 88.5500
928 CA ASP 135 0.0610 77.7705 82.6700
936 CA VAL 136 0.0307 71.8668 76.9600
943 CA VAL 137 0.0312 71.9583 75.2400
950 CA ARG 138 0.0331 72.3300 71.0200
961 CA VAL 139 0.0199 69.7719 65.4900
968 CA TRP 140 0.0193 69.6530 63.0900
982 CA PHE 141 0.0273 71.2112 64.1600
993 CA SER 142 0.0228 70.3283 61.7700
998 CA ASN 143 0.0184 69.4791 60.0000
1006 CA ARG 144 0.0373 73.1497 63.9000
1017 CA ARG 145 0.0449 74.6332 66.4600
1028 CA GLN 146 0.0451 74.6836 66.9700
1037 CA LYS 147 0.0774 80.9819 70.3400
1042 CA GLY 148 0.1555 96.2005 75.8000
1046 CA LYS 149 0.2112 107.0756 78.7000
1051 CA ARG 150 0.4547 154.5674 79.6500
1056 CA LYS 3 0.6061 184.0929 123.2700
1061 CA ALA 4 0.4215 148.0929 120.4700
1066 CA LEU 5 0.1339 91.9930 109.2600
1071 CA GLN 6 0.1134 88.0044 104.6200
1076 CA LYS 7 0.1232 89.9039 108.0700
1081 CA GLU 8 0.0859 82.6437 102.3500
1087 CA LEU 9 0.0446 74.5780 92.7000
1095 CA GLU 10 0.0549 76.5849 91.0700
1101 CA GLN 11 0.0555 76.7025 91.0300
1106 CA PHE 12 0.0360 72.9031 83.9200
1117 CA ALA 13 0.0287 71.4802 77.8900
1122 CA LYS 14 0.0387 73.4285 78.5000
1128 CA LEU 15 0.0353 72.7679 77.7400
1136 CA LEU 16 0.0236 70.4771 70.9500
1144 CA LYS 17 0.0229 70.3452 67.5000
1153 CA GLN 18 0.0321 72.1484 69.4400
1162 CA LYS 19 0.0297 71.6814 68.9300
1171 CA ARG 20 0.0218 70.1279 63.6900
1182 CA ILE 21 0.0268 71.1022 63.3000
1190 CA THR 22 0.0406 73.8072 66.0100
1197 CA LEU 23 0.0388 73.4490 64.6300
1205 CA GLY 24 0.0366 73.0152 59.5900
1209 CA TYR 25 0.0233 70.4170 56.4900
1221 CA THR 26 0.0186 69.5175 50.3900
1228 CA GLN 27 0.0132 68.4640 46.0300
1237 CA ALA 28 0.0143 68.6648 45.5600
1242 CA ASP 29 0.0191 69.6107 49.9400
1250 CA VAL 30 0.0157 68.9344 50.3900
1257 CA GLY 31 0.0151 68.8177 50.3300
1261 CA LEU 32 0.0194 69.6599 54.3900
1269 CA THR 33 0.0228 70.3293 59.4000
1276 CA LEU 34 0.0210 69.9734 59.1600
1284 CA GLY 35 0.0289 71.5272 61.2300
1288 CA VAL 36 0.0356 72.8274 65.9900
1295 CA LEU 37 0.0378 73.2503 66.9100
1303 CA PHE 38 0.0411 73.8882 65.4600
1314 CA GLY 39 0.0468 75.0175 63.5100
1318 CA LYS 40 0.0344 72.5845 57.5200
1323 CA VAL 41 0.0189 69.5709 52.1600
1330 CA PHE 42 0.0138 68.5755 45.5100
1341 CA SER 43 0.0110 68.0290 42.0300
1347 CA GLN 44 0.0111 68.0421 40.1900
1356 CA THR 45 0.0110 68.0210 39.1900
1363 CA THR 46 0.0106 67.9494 41.9000
1370 CA ILE 47 0.0113 68.0853 44.7700
1378 CA SER 48 0.0126 68.3488 47.0300
1384 CA ARG 49 0.0140 68.6092 50.4200
1395 CA PHE 50 0.0149 68.7834 54.2600
1406 CA GLU 51 0.0173 69.2556 56.7100
1415 CA ALA 52 0.0230 70.3599 60.4600
1420 CA LEU 53 0.0269 71.1339 65.5900
1428 CA GLN 54 0.0270 71.1383 64.6800
1437 CA LEU 55 0.0239 70.5457 63.3100
1445 CA SER 56 0.0317 72.0597 67.9300
1451 CA LEU 57 0.0535 76.3115 73.5900
1459 CA LYS 58 0.0475 75.1510 73.4300
1465 CA ASN 59 0.0247 70.7079 67.5100
1473 CA MET 60 0.0228 70.3297 69.0000
1481 CA SER 61 0.0342 72.5506 74.3300
1487 CA LYS 62 0.0337 72.4582 71.6700
1493 CA LEU 63 0.0219 70.1438 68.7300
1501 CA ARG 64 0.0243 70.6290 72.7000
1512 CA PRO 65 0.0310 71.9309 75.9200
1519 CA LEU 66 0.0257 70.8950 71.5600
1527 CA LEU 67 0.0210 69.9777 70.1500
1535 CA GLU 68 0.0287 71.4751 76.6800
1544 CA LYS 69 0.0329 72.3043 78.6500
1550 CA TRP 70 0.0253 70.8236 75.2500
1564 CA VAL 71 0.0295 71.6346 79.3700
1571 CA GLU 72 0.0446 74.5857 89.1600
1580 CA GLU 73 0.0441 74.4845 91.4500
1589 CA ALA 74 0.0397 73.6150 90.3500
1594 CA ASP 75 0.0596 77.5105 97.0400
1602 CA ASN 76 0.0869 82.8290 104.6600
1610 CA ASN 77 0.0800 81.4909 106.0300
1618 CA GLU 78 0.0596 77.4972 100.8000
1623 CA ASN 79 0.0923 83.8822 105.4200
1631 CA LEU 80 0.0947 84.3490 109.8700
1639 CA GLN 81 0.0483 75.2995 103.9300
1648 CA GLU 82 0.0574 77.0764 104.0900
1657 CA ILE 83 0.0803 81.5489 111.2300
1662 CA SER 84 0.0715 79.8220 111.4000
1668 CA LYS 85 0.0504 75.7053 105.2600
1673 CA SER 86 0.0635 78.2646 105.4400
1678 CA GLN 91 0.1943 103.7741 103.1400
1683 CA ALA 92 0.1073 86.8028 95.6800
1688 CA ARG 93 0.0659 78.7348 91.2100
1696 CA LYS 94 0.0478 75.2093 84.7100
1701 CA ARG 95 0.0187 69.5274 78.9200
1708 CA LYS 96 0.0167 69.1445 75.0300
1713 CA ARG 97 0.0124 68.2954 69.6000
1724 CA THR 98 0.0138 68.5667 71.4700
1731 CA SER 99 0.0169 69.1811 72.2700
1737 CA ILE 100 0.0206 69.8933 75.3300
1745 CA GLU 101 0.0412 73.9266 79.0000
1754 CA ASN 102 0.0816 81.7996 80.2900
1762 CA ARG 103 0.0763 80.7586 83.9200
1767 CA VAL 104 0.0450 74.6583 81.0000
1774 CA ARG 105 0.0436 74.3914 78.0800
1779 CA TRP 106 0.0719 79.9114 84.3700
1793 CA SER 107 0.0677 79.0871 87.5300
1799 CA LEU 108 0.0443 74.5252 84.3600
1807 CA GLU 109 0.0613 77.8461 86.8000
1816 CA THR 110 0.0934 84.0895 93.2300
1823 CA MET 111 0.0742 80.3498 92.7000
1831 CA PHE 112 0.0636 78.2826 91.3500
1842 CA LEU 113 0.1158 88.4631 97.4900
1847 CA LYS 114 0.1539 95.8902 101.3100
1852 CA SER 115 0.0992 85.2323 97.6800
1858 CA PRO 116 0.0738 80.2799 95.1000
1865 CA LYS 117 0.0691 79.3615 95.1200
1874 CA PRO 118 0.0761 80.7181 95.8200
1881 CA SER 119 0.1101 87.3619 97.9800
1887 CA LEU 120 0.1034 86.0503 98.0000
1895 CA GLN 121 0.1392 93.0245 103.2700
1900 CA GLN 122 0.1038 86.1245 101.7100
1909 CA ILE 123 0.0664 78.8395 96.9400
1917 CA THR 124 0.0983 85.0530 100.3700
1924 CA HIS 125 0.1130 87.9208 103.2500
1929 CA ILE 126 0.0738 80.2778 98.2800
1937 CA ALA 127 0.0663 78.8031 96.0000
1942 CA ASN 128 0.1088 87.0979 101.2100
1950 CA GLN 129 0.1106 87.4621 101.4500
1959 CA LEU 130 0.0794 81.3712 94.9600
1967 CA GLY 131 0.0883 83.0943 94.3200
1971 CA LEU 132 0.0588 77.3456 87.5300
1979 CA GLU 133 0.0772 80.9332 86.1600
1988 CA LYS 134 0.0607 77.7157 84.4300
1993 CA ASP 135 0.0452 74.6944 79.5300
2001 CA VAL 136 0.0269 71.1216 74.7000
2008 CA VAL 137 0.0287 71.4702 73.7400
2015 CA ARG 138 0.0314 72.0119 70.9800
2026 CA VAL 139 0.0185 69.4950 65.9800
2033 CA TRP 140 0.0157 68.9476 63.5300
2047 CA PHE 141 0.0248 70.7148 65.9500
2058 CA SER 142 0.0248 70.7171 65.1900
2064 CA ASN 143 0.0192 69.6221 62.8800
2072 CA ARG 144 0.0301 71.7582 66.7200
2083 CA ARG 145 0.0435 74.3675 71.7900
2094 CA GLN 146 0.0424 74.1501 72.3400
2103 CA LYS 147 0.0766 80.8173 74.9600
2108 CA GLY 148 0.1161 88.5199 82.4100
2112 CA LYS 149 0.1748 99.9789 87.3500
2118 CA ARG 150 0.2628 117.1422 86.7900
2123 CA SER 151 0.7747 216.9670 93.7400

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.