CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  4JBU  ***

B-factor analysis for ID 240228061230937826

Overall B-factor prediction

Correlation= 0.455 for 283 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   GLY      1      0.1798     31.3425     40.3800
     6 CA   HIS      2      0.1751     30.9649     28.9400
    11 CA   MET      3      0.1739     30.8661     25.7800
    19 CA   GLY      4      0.1274     27.1103     29.3700
    23 CA   SER      5      0.1226     26.7257     34.3700
    29 CA   SER      6      0.0899     24.0827     27.5900
    35 CA   VAL      7      0.0548     21.2461     21.6800
    42 CA   LEU      8      0.0567     21.4054     25.0300
    50 CA   GLU      9      0.0827     23.5050     36.7900
    59 CA   GLU     10      0.0696     22.4420     28.9500
    68 CA   LEU     11      0.0468     20.6063     20.8300
    76 CA   VAL     12      0.0666     22.2051     32.4400
    83 CA   GLN     13      0.0997     24.8743     28.9400
    92 CA   LEU     14      0.0755     22.9190     31.7600
   100 CA   VAL     15      0.0653     22.0963     25.9000
   107 CA   LYS     16      0.1077     25.5244     26.9500
   113 CA   ASP     17      0.1310     27.4053     30.2400
   121 CA   LYS     18      0.1057     25.3606     23.1100
   130 CA   ASN     19      0.1074     25.4960     23.4800
   138 CA   ILE     20      0.0674     22.2702     23.6700
   146 CA   ASP     21      0.0555     21.3065     27.5500
   147 CA   ASP     21      0.0548     21.2508     27.6000
   159 CA   ILE     22      0.0337     19.5460     19.9000
   167 CA   SER     23      0.0383     19.9170     19.6100
   168 CA   SER     23      0.0385     19.9328     19.5200
   176 CA   ILE     24      0.0371     19.8161     21.3900
   184 CA   LYS     25      0.0520     21.0193     17.8500
   193 CA   TYR     26      0.0710     22.5556     19.2400
   205 CA   ASP     27      0.0725     22.6807     26.2000
   213 CA   PRO     28      0.1089     25.6220     32.9200
   220 CA   ARG     29      0.1083     25.5705     44.2500
   231 CA   LYS     30      0.1101     25.7176     27.7600
   237 CA   ASP     31      0.1292     27.2610     30.2800
   245 CA   SER     32      0.2247     34.9756     38.8200
   251 CA   GLU     33      0.2368     35.9480     22.4900
   260 CA   VAL     34      0.1754     30.9928     17.7000
   267 CA   PHE     35      0.1437     28.4273     19.1500
   278 CA   ALA     36      0.1492     28.8763     20.8500
   283 CA   ASN     37      0.0818     23.4337     15.5600
   291 CA   ARG     38      0.0763     22.9838     17.6200
   302 CA   VAL     39      0.0597     21.6442     22.2400
   309 CA   ILE     40      0.0466     20.5854     29.2200
   317 CA   THR     41      0.0554     21.2939     35.8200
   324 CA   ASP     42      0.0933     24.3620     48.4400
   332 CA   ASP     43      0.0881     23.9395     39.6600
   340 CA   ILE     44      0.0806     23.3357     43.6700
   348 CA   GLU     45      0.0995     24.8597     39.3900
   357 CA   LEU     46      0.0643     22.0148     33.5000
   365 CA   LEU     47      0.0421     20.2235     27.8600
   373 CA   LYS     48      0.0544     21.2188     22.5100
   382 CA   LYS     49      0.0528     21.0851     24.7800
   388 CA   ILE     50      0.0284     19.1142     17.3600
   396 CA   LEU     51      0.0275     19.0407     18.4600
   404 CA   ALA     52      0.0450     20.4597     20.9800
   409 CA   TYR     53      0.0343     19.5944     26.3700
   421 CA   PHE     54      0.0286     19.1346     20.4800
   432 CA   LEU     55      0.0492     20.7935     20.9100
   440 CA   PRO     56      0.0858     23.7548     19.2900
   447 CA   GLU     57      0.1222     26.6939     25.0200
   456 CA   ASP     58      0.1345     27.6834     25.1800
   464 CA   ALA     59      0.0789     23.1967     23.5900
   469 CA   ILE     60      0.0653     22.0980     23.5600
   477 CA   LEU     61      0.1071     25.4702     26.1100
   485 CA   LYS     62      0.1335     27.6042     25.9200
   490 CA   GLY     63      0.1087     25.6047     31.8500
   494 CA   GLY     64      0.1426     28.3387     27.1500
   498 CA   HIS     65      0.1760     31.0365     22.6400
   508 CA   TYR     66      0.1176     26.3248     23.6100
   520 CA   ASP     67      0.1398     28.1191     22.4100
   528 CA   ASN     68      0.1355     27.7673     22.7000
   536 CA   GLN     69      0.0886     23.9756     19.6900
   545 CA   LEU     70      0.0626     21.8756     14.0000
   553 CA   GLN     71      0.0736     22.7711     20.6100
   562 CA   ASN     72      0.0747     22.8593     23.2400
   570 CA   GLY     73      0.0414     20.1631     16.9800
   574 CA   ILE     74      0.0392     19.9908     18.9600
   575 CA   ILE     74      0.0393     19.9970     18.9800
   587 CA   LYS     75      0.0593     21.6091     20.6300
   588 CA   LYS     75      0.0593     21.6087     20.6300
   602 CA   ARG     76      0.0427     20.2692     16.3200
   613 CA   VAL     77      0.0269     18.9920     17.4200
   620 CA   LYS     78      0.0437     20.3483     20.7100
   629 CA   GLU     79      0.0575     21.4706     15.9000
   638 CA   PHE     80      0.0406     20.1037     16.9900
   649 CA   LEU     81      0.0421     20.2235     18.7200
   657 CA   GLU     82      0.0722     22.6556     22.5300
   666 CA   SER     83      0.0786     23.1706     18.3200
   672 CA   SER     84      0.0731     22.7292     22.1100
   678 CA   PRO     85      0.0947     24.4715     27.0800
   685 CA   ASN     86      0.1182     26.3733     22.6200
   693 CA   THR     87      0.0788     23.1874     31.9500
   700 CA   GLN     88      0.0601     21.6748     20.3500
   709 CA   TRP     89      0.0343     19.5925     16.7200
   723 CA   GLU     90      0.0259     18.9171     15.6200
   732 CA   LEU     91      0.0152     18.0525     13.7700
   740 CA   ARG     92      0.0139     17.9488     19.0400
   751 CA   ALA     93      0.0157     18.0923     16.5300
   756 CA   PHE     94      0.0103     17.6521     17.4100
   767 CA   MET     95      0.0075     17.4291     12.9700
   775 CA   ALA     96      0.0122     17.8041     14.7100
   780 CA   VAL     97      0.0147     18.0090     16.2300
   787 CA   MET     98      0.0111     17.7173     17.4000
   788 CA   MET     98      0.0111     17.7223     17.5300
   800 CA   HIS     99      0.0165     18.1511     11.6700
   810 CA   PHE    100      0.0240     18.7576     12.9500
   821 CA   SER    101      0.0268     18.9901     17.5400
   827 CA   LEU    102      0.0285     19.1216     22.0500
   835 CA   THR    103      0.0433     20.3173     22.6300
   842 CA   ALA    104      0.0777     23.0966     36.4500
   847 CA   ASP    105      0.0497     20.8377     29.8100
   855 CA   ARG    106      0.0483     20.7245     30.8700
   866 CA   ILE    107      0.0474     20.6505     23.3400
   874 CA   ASP    108      0.0604     21.6977     17.6700
   882 CA   ASP    109      0.0599     21.6571     17.1200
   890 CA   ASP    110      0.0745     22.8429     22.1300
   898 CA   ILE    111      0.0604     21.7019     17.3100
   906 CA   LEU    112      0.0403     20.0748     15.5900
   914 CA   LYS    113      0.0501     20.8677     16.9100
   923 CA   VAL    114      0.0599     21.6598     15.2500
   930 CA   ILE    115      0.0412     20.1498     15.4600
   938 CA   VAL    116      0.0322     19.4233     16.2200
   945 CA   ASP    117      0.0528     21.0854     20.2900
   953 CA   SER    118      0.0553     21.2859     15.5600
   959 CA   MET    119      0.0358     19.7134     15.0700
   967 CA   ASN    120      0.0417     20.1871     19.2900
   975 CA   HIS    121      0.0764     22.9925     19.0400
   985 CA   HIS    122      0.0626     21.8829     19.0600
   995 CA   GLY    123      0.0669     22.2246     19.8400
   999 CA   ASP    124      0.0622     21.8451     19.8500
  1007 CA   ALA    125      0.0520     21.0207     17.4000
  1012 CA   ARG    126      0.0633     21.9385     22.0800
  1023 CA   SER    127      0.0866     23.8202     23.2500
  1029 CA   LYS    128      0.0758     22.9418     18.9500
  1038 CA   LEU    129      0.0679     22.3073     16.1100
  1046 CA   ARG    130      0.0886     23.9790     16.7800
  1057 CA   GLU    131      0.0956     24.5450     18.2000
  1066 CA   GLU    132      0.0845     23.6484     21.8700
  1075 CA   LEU    133      0.0810     23.3661     19.6000
  1083 CA   ALA    134      0.0821     23.4523     23.8800
  1088 CA   GLU    135      0.0721     22.6450     20.5300
  1097 CA   LEU    136      0.0677     22.2911     20.3200
  1105 CA   THR    137      0.0589     21.5826     23.0900
  1112 CA   ALA    138      0.0452     20.4769     16.7300
  1117 CA   GLU    139      0.0376     19.8626     20.8900
  1126 CA   LEU    140      0.0394     20.0011     18.0100
  1134 CA   LYS    141      0.0348     19.6370     17.0200
  1143 CA   ILE    142      0.0185     18.3199     15.6500
  1151 CA   TYR    143      0.0229     18.6690     21.2400
  1163 CA   SER    144      0.0337     19.5480     22.3400
  1169 CA   VAL    145      0.0258     18.9032     21.3600
  1176 CA   ILE    146      0.0191     18.3660     20.1000
  1184 CA   GLN    147      0.0411     20.1389     27.1200
  1193 CA   ALA    148      0.0617     21.8062     27.5800
  1198 CA   GLU    149      0.0523     21.0445     21.7800
  1207 CA   ILE    150      0.0569     21.4223     23.9200
  1215 CA   ASN    151      0.1012     24.9999     27.0200
  1223 CA   LYS    152      0.1236     26.8062     26.6600
  1232 CA   HIS    153      0.1186     26.3991     22.8100
  1242 CA   LEU    154      0.1444     28.4903     23.6700
  1250 CA   SER    155      0.2300     35.4022     21.0300
  1256 CA   SER    156      0.2458     36.6746     24.4800
  1257 CA   SER    156      0.2460     36.6954     24.3800
  1265 CA   SER    157      0.2326     35.6117     21.1700
  1271 CA   GLY    158      0.1863     31.8736     20.2800
  1275 CA   THR    159      0.1330     27.5623     23.1200
  1282 CA   ILE    160      0.0809     23.3585     25.4100
  1290 CA   ASN    161      0.0731     22.7286     21.9200
  1298 CA   ILE    162      0.0492     20.7979     19.1000
  1306 CA   HIS    163      0.0723     22.6625     18.3800
  1316 CA   ASP    164      0.1009     24.9718     25.7200
  1324 CA   LYS    165      0.1066     25.4313     26.0900
  1333 CA   SER    166      0.0510     20.9449     20.6800
  1339 CA   ILE    167      0.0398     20.0405     19.9700
  1347 CA   ASN    168      0.0390     19.9758     17.7300
  1355 CA   LEU    169      0.0238     18.7412     16.8200
  1363 CA   MET    170      0.0430     20.2992     21.4300
  1371 CA   ASP    171      0.0679     22.3055     23.0100
  1379 CA   LYS    172      0.0809     23.3609     17.1500
  1388 CA   ASN    173      0.1076     25.5105     27.4900
  1396 CA   LEU    174      0.0649     22.0685     25.3400
  1404 CA   TYR    175      0.0703     22.4989     20.0900
  1416 CA   GLY    176      0.1314     27.4384     33.5400
  1420 CA   TYR    177      0.1425     28.3364     20.4700
  1432 CA   THR    178      0.2105     33.8226     19.4100
  1439 CA   ASP    179      0.2258     35.0600     18.6000
  1447 CA   GLU    180      0.1792     31.2994     25.3000
  1456 CA   GLU    181      0.2343     35.7496     21.8000
  1465 CA   ILE    182      0.1969     32.7266     19.8800
  1473 CA   PHE    183      0.1137     26.0053     17.4700
  1484 CA   LYS    184      0.1299     27.3163     26.2100
  1493 CA   ALA    185      0.1587     29.6400     22.0400
  1498 CA   SER    186      0.1083     25.5726     17.2800
  1504 CA   ALA    187      0.0765     23.0054     15.0400
  1509 CA   GLU    188      0.0478     20.6866     13.7400
  1518 CA   TYR    189      0.0633     21.9372     18.1100
  1530 CA   LYS    190      0.0875     23.8879     23.8900
  1539 CA   ILE    191      0.0561     21.3551     17.6500
  1547 CA   LEU    192      0.0449     20.4468     18.4400
  1555 CA   GLU    193      0.0862     23.7856     21.2300
  1564 CA   LYS    194      0.0978     24.7208     25.8900
  1573 CA   MET    195      0.0702     22.4911     20.9500
  1581 CA   PRO    196      0.0902     24.1116     27.9400
  1588 CA   GLN    197      0.0926     24.3049     19.6700
  1597 CA   THR    198      0.1015     25.0181     25.2800
  1604 CA   THR    199      0.1660     30.2294     30.2300
  1611 CA   ILE    200      0.1741     30.8873     27.1500
  1619 CA   GLN    201      0.3259     43.1504     32.4500
  1628 CA   VAL    202      0.4189     50.6570     44.0800
  1635 CA   ASP    203      0.8644     86.6449     45.3300
  1643 CA   GLY    204      0.7997     81.4179     31.1700
  1647 CA   SER    205      0.5186     58.7142     40.7600
  1653 CA   GLU    206      0.3234     42.9471     41.2200
  1658 CA   LYS    207      0.1869     31.9218     33.6300
  1667 CA   LYS    208      0.1351     27.7329     30.6600
  1676 CA   ILE    209      0.0661     22.1616     23.5400
  1684 CA   VAL    210      0.0427     20.2706     17.0800
  1691 CA   SER    211      0.0353     19.6751     20.2300
  1697 CA   ILE    212      0.0241     18.7670     21.4800
  1705 CA   LYS    213      0.0478     20.6839     21.5100
  1714 CA   ASP    214      0.0542     21.1979     24.3200
  1722 CA   PHE    215      0.0336     19.5396     16.3200
  1733 CA   LEU    216      0.0429     20.2864     23.2800
  1741 CA   GLY    217      0.0804     23.3146     27.6800
  1745 CA   SER    218      0.0844     23.6362     24.0400
  1751 CA   GLU    219      0.1325     27.5247     36.5600
  1760 CA   ASN    220      0.1099     25.6979     40.6200
  1768 CA   LYS    221      0.0659     22.1451     37.1000
  1777 CA   ARG    222      0.0726     22.6898     37.3600
  1788 CA   THR    223      0.0818     23.4267     32.6200
  1795 CA   GLY    224      0.1014     25.0144     39.9300
  1799 CA   ALA    225      0.1068     25.4476     32.1900
  1804 CA   LEU    226      0.1017     25.0356     39.2100
  1812 CA   GLY    227      0.2497     36.9942     41.3200
  1816 CA   ASN    228      0.2551     37.4300     55.3800
  1824 CA   LEU    229      0.1218     26.6576     32.9300
  1832 CA   LYS    230      0.1327     27.5419     37.1800
  1841 CA   ASN    231      0.1036     25.1936     21.6200
  1849 CA   SER    232      0.0996     24.8650     31.6300
  1855 CA   TYR    233      0.1128     25.9345     26.4600
  1867 CA   SER    234      0.1615     29.8702     23.7100
  1873 CA   TYR    235      0.1910     32.2472     29.6600
  1885 CA   ASN    236      0.3073     41.6426     35.0500
  1893 CA   LEU    237      0.0969     24.6512     40.9400
  1901 CA   ASN    238      0.0846     23.6554     34.1900
  1909 CA   ASP    239      0.1402     28.1511     41.0700
  1917 CA   LEU    240      0.1102     25.7257     35.4300
  1922 CA   VAL    241      0.0594     21.6186     27.0500
  1929 CA   SER    242      0.0814     23.3938     28.0300
  1935 CA   GLN    243      0.1081     25.5515     32.1400
  1944 CA   LYS    244      0.0774     23.0730     32.9900
  1953 CA   THR    245      0.0596     21.6359     19.7200
  1960 CA   THR    246      0.0932     24.3512     25.7900
  1967 CA   GLN    247      0.1005     24.9414     26.7500
  1976 CA   LEU    248      0.0734     22.7546     24.5800
  1984 CA   SER    249      0.0796     23.2550     23.8300
  1990 CA   ASP    250      0.0976     24.7075     19.7400
  1998 CA   ILE    251      0.0889     24.0030     21.8900
  2006 CA   THR    252      0.0825     23.4900     25.7000
  2013 CA   SER    253      0.0923     24.2764     21.1900
  2019 CA   ARG    254      0.0834     23.5586     17.6600
  2030 CA   PHE    255      0.0773     23.0672     23.4000
  2041 CA   ASN    256      0.0876     23.8953     23.4400
  2049 CA   SER    257      0.0786     23.1753     23.9600
  2050 CA   SER    257      0.0786     23.1750     23.9500
  2058 CA   ALA    258      0.0591     21.5999     20.7000
  2063 CA   ILE    259      0.0642     22.0053     21.2800
  2071 CA   GLU    260      0.0727     22.6971     25.9100
  2080 CA   ALA    261      0.0495     20.8204     23.5400
  2085 CA   LEU    262      0.0410     20.1366     23.0400
  2093 CA   ASN    263      0.0576     21.4758     24.8300
  2101 CA   ARG    264      0.0526     21.0726     22.6500
  2112 CA   PHE    265      0.0303     19.2704     22.0000
  2123 CA   ILE    266      0.0365     19.7713     23.6300
  2131 CA   GLN    267      0.0608     21.7304     27.8000
  2140 CA   LYS    268      0.0433     20.3221     27.1400
  2149 CA   TYR    269      0.0288     19.1471     19.1800
  2161 CA   ASP    270      0.0497     20.8369     28.7400
  2169 CA   SER    271      0.0675     22.2725     23.6900
  2175 CA   VAL    272      0.0484     20.7354     26.7900
  2182 CA   MET    273      0.0592     21.6035     24.4100
  2190 CA   GLN    274      0.1125     25.9123     30.8400
  2199 CA   ARG    275      0.1081     25.5538     40.7200
  2210 CA   LEU    276      0.0973     24.6817     33.3000

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.