Should you encounter any unexpected behaviour,
please let us know.

* 1P5V *

B-factor analysis for ID 240228061130936516

Overall B-factor prediction

Correlation= 0.114 for 196 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA PHE 1 15.0678 35.7358 13.3100
13 CA ALA 2 7.0986 23.1417 10.9600
18 CA SER 3 2.3061 15.5680 13.8000
24 CA LYS 4 0.5168 12.7402 14.6400
29 CA GLU 5 0.3050 12.4055 12.1000
34 CA TYR 6 0.2035 12.2450 10.3500
46 CA GLY 7 0.1520 12.1638 12.0800
50 CA VAL 8 0.0954 12.0743 9.3400
57 CA THR 9 0.0860 12.0594 9.9600
64 CA ILE 10 0.0528 12.0069 7.0000
72 CA GLY 11 0.0629 12.0229 11.1600
76 CA GLU 12 0.0487 12.0005 11.0200
85 CA SER 13 0.0483 11.9999 10.9200
91 CA ARG 14 0.0277 11.9672 7.3200
102 CA ILE 15 0.0204 11.9558 9.2000
110 CA ILE 16 0.0240 11.9615 7.9300
118 CA TYR 17 0.0301 11.9710 7.4400
130 CA PRO 18 0.0542 12.0092 9.2000
137 CA LEU 19 0.0667 12.0289 10.7400
145 CA ASP 20 0.0943 12.0726 13.4000
153 CA ALA 21 0.0790 12.0484 11.0400
158 CA ALA 22 0.1139 12.1035 11.1200
163 CA GLY 23 0.0500 12.0025 9.2600
167 CA VAL 24 0.0356 11.9798 10.6100
174 CA MET 25 0.0385 11.9843 12.9000
182 CA VAL 26 0.0325 11.9749 11.2800
190 CA SER 27 0.0465 11.9969 9.4400
191 CA SER 27 0.0467 11.9972 8.9700
203 CA VAL 28 0.0515 12.0048 7.8800
204 CA VAL 28 0.0519 12.0054 8.3100
205 CA VAL 28 0.0519 12.0054 7.6400
222 CA LYS 29 0.0819 12.0529 9.7300
231 CA ASN 30 0.1054 12.0901 8.4200
239 CA THR 31 0.1498 12.1603 10.8500
246 CA GLN 32 0.1848 12.2155 7.9700
255 CA ASP 33 0.2452 12.3110 9.6100
263 CA TYR 34 0.2110 12.2570 8.7400
275 CA PRO 35 0.1606 12.1774 9.5400
282 CA VAL 36 0.1251 12.1212 9.3200
289 CA LEU 37 0.1035 12.0871 10.2500
297 CA ILE 38 0.0705 12.0348 8.2100
305 CA GLN 39 0.0744 12.0410 7.1300
314 CA SER 40 0.0513 12.0046 12.2400
320 CA ARG 41 0.0629 12.0228 12.8700
331 CA ILE 42 0.0543 12.0092 13.5400
339 CA TYR 43 0.0838 12.0560 16.6500
351 CA ASP 44 0.1912 12.2257 27.3500
359 CA PRO 45 0.1000 12.0815 24.8900
366 CA PHE 46 0.0557 12.0115 18.7400
377 CA VAL 47 0.0594 12.0174 15.7100
385 CA VAL 48 0.0409 11.9881 11.5700
386 CA VAL 48 0.0405 11.9875 11.4000
398 CA THR 49 0.0473 11.9983 12.3100
405 CA PRO 50 0.0552 12.0107 12.8500
412 CA PRO 51 0.0644 12.0253 11.2600
419 CA LEU 52 0.0798 12.0495 8.1100
427 CA PHE 53 0.0807 12.0510 8.7700
438 CA ARG 54 0.1065 12.0918 10.5500
449 CA LEU 55 0.0942 12.0724 8.0700
457 CA ASP 56 0.1426 12.1488 4.7600
465 CA ALA 57 0.1699 12.1921 4.9700
470 CA LYS 58 0.1699 12.1921 3.9200
479 CA GLN 59 0.1288 12.1271 4.1500
488 CA GLN 60 0.0883 12.0630 8.6200
497 CA ASN 61 0.0637 12.0241 9.8100
506 CA SER 62 0.0459 11.9961 12.8700
507 CA SER 62 0.0457 11.9957 13.3300
517 CA LEU 63 0.0318 11.9738 10.9300
525 CA ARG 64 0.0350 11.9787 9.9800
536 CA ILE 65 0.0282 11.9680 9.8200
544 CA ALA 66 0.0450 11.9946 10.7000
549 CA GLN 67 0.0616 12.0208 15.1900
558 CA ALA 68 0.1051 12.0896 25.6800
562 CA GLY 69 0.1606 12.1772 34.8200
566 CA GLY 70 0.1365 12.1392 37.9100
570 CA VAL 71 0.2169 12.2663 36.3300
574 CA PHE 72 0.1143 12.1041 31.0600
585 CA PRO 73 0.1247 12.1206 29.4700
592 CA ARG 74 0.1423 12.1483 29.8100
596 CA ASP 75 0.1307 12.1300 26.1000
600 CA LYS 76 0.0743 12.0409 22.2700
609 CA GLU 77 0.0428 11.9911 12.0100
618 CA SER 78 0.0439 11.9928 9.6600
624 CA LEU 79 0.0328 11.9753 11.6200
632 CA LYS 80 0.0396 11.9860 10.6800
641 CA TRP 81 0.0403 11.9872 8.8100
655 CA LEU 82 0.0331 11.9758 7.4200
663 CA CYS 83 0.0525 12.0065 9.8400
669 CA VAL 84 0.0531 12.0074 8.9100
676 CA LYS 85 0.0855 12.0587 9.2700
685 CA GLY 86 0.1011 12.0833 9.3700
689 CA ILE 87 0.1383 12.1420 12.5600
697 CA PRO 88 0.1799 12.2078 18.3300
704 CA LYS 89 38.2385 72.3533 19.2600
709 CA ASP 90 21.7370 46.2754 18.3900
714 CA VAL 91 11.9436 30.7984 15.5200
721 CA GLY 92 6.2751 21.8403 13.2300
725 CA VAL 93 2.7312 16.2397 15.1400
732 CA PHE 94 1.3350 14.0332 17.1800
743 CA VAL 95 0.5295 12.7603 14.9400
750 CA GLN 96 0.3591 12.4910 16.9700
758 CA PHE 97 0.2699 12.3501 13.1500
769 CA ALA 98 0.1839 12.2141 12.3900
774 CA ILE 99 0.1412 12.1467 10.3200
782 CA ASN 100 0.1029 12.0862 9.2500
790 CA ASN 101 0.0766 12.0445 7.2900
798 CA CYS 102 0.0573 12.0141 7.5200
804 CA ILE 103 0.0375 11.9827 6.0700
812 CA LYS 104 0.0255 11.9638 6.4100
821 CA LEU 105 0.0205 11.9560 8.7400
829 CA LEU 106 0.0204 11.9557 8.5900
837 CA VAL 107 0.0322 11.9744 9.8400
844 CA ARG 108 0.0434 11.9921 7.8400
855 CA PRO 109 0.0785 12.0475 14.0800
862 CA ASN 110 0.1265 12.1234 20.1400
870 CA GLU 111 0.1850 12.2159 22.5200
879 CA LEU 112 0.1175 12.1091 24.3000
887 CA LYS 113 0.1968 12.2345 22.2300
891 CA GLY 114 0.1255 12.1218 20.0900
895 CA THR 115 0.0682 12.0313 17.8900
902 CA PRO 116 0.0379 11.9834 14.9100
909 CA ILE 117 0.0546 12.0097 15.5200
917 CA GLN 118 0.0846 12.0572 14.1300
926 CA PHE 119 0.0562 12.0123 13.0100
937 CA ALA 120 0.0400 11.9867 12.2600
942 CA GLU 121 0.0572 12.0139 11.6800
951 CA ASN 122 0.0554 12.0110 12.6300
959 CA LEU 123 0.0352 11.9791 13.1200
967 CA SER 124 0.0523 12.0061 12.7100
973 CA TRP 125 0.0606 12.0193 12.8100
987 CA LYS 126 0.1048 12.0891 15.2300
996 CA VAL 127 0.1399 12.1446 15.1100
1003 CA ASP 128 0.2262 12.2809 16.0100
1011 CA GLY 129 0.4232 12.5922 13.8700
1015 CA GLY 130 0.2907 12.3829 14.2600
1019 CA LYS 131 0.1690 12.1906 13.6200
1028 CA LEU 132 0.1009 12.0830 11.8500
1036 CA ILE 133 0.0798 12.0497 12.5900
1044 CA ALA 134 0.0452 11.9949 12.4200
1049 CA GLU 135 0.0513 12.0046 12.8700
1058 CA ASN 136 0.0406 11.9876 12.4600
1066 CA PRO 137 0.0674 12.0301 12.8000
1073 CA SER 138 0.0561 12.0122 11.7500
1079 CA PRO 139 0.0580 12.0151 11.6100
1086 CA PHE 140 0.0316 11.9735 10.9200
1097 CA TYR 141 0.0196 11.9544 10.4000
1109 CA MET 142 0.0159 11.9487 10.1400
1117 CA ASN 143 0.0208 11.9564 9.9100
1125 CA ILE 144 0.0334 11.9763 10.0100
1133 CA GLY 145 0.0651 12.0265 10.9500
1137 CA GLU 146 0.0881 12.0627 11.1200
1146 CA LEU 147 0.0816 12.0525 9.7300
1154 CA THR 148 0.1158 12.1066 10.4500
1161 CA PHE 149 0.1252 12.1214 10.5700
1172 CA GLY 150 0.2049 12.2472 13.0500
1176 CA GLY 151 0.2248 12.2788 14.7300
1180 CA LYS 152 0.2349 12.2948 14.4800
1189 CA SER 153 0.2018 12.2424 13.9200
1195 CA ILE 154 0.1465 12.1550 12.1300
1203 CA PRO 155 0.1520 12.1636 12.2800
1210 CA SER 156 0.0826 12.0540 14.5100
1216 CA HIS 157 0.0605 12.0191 10.9900
1226 CA TYR 158 0.0312 11.9727 9.8800
1238 CA ILE 159 0.0281 11.9679 11.4600
1246 CA PRO 160 0.0382 11.9838 11.6000
1253 CA PRO 161 0.0440 11.9931 13.7800
1260 CA LYS 162 0.0746 12.0415 11.9400
1269 CA SER 163 0.0718 12.0370 13.0700
1275 CA THR 164 0.0647 12.0257 13.4900
1282 CA TRP 165 0.0674 12.0300 12.5300
1296 CA ALA 166 0.1012 12.0835 10.9100
1301 CA PHE 167 0.1145 12.1044 12.3300
1312 CA ASP 168 0.1935 12.2293 18.5400
1320 CA LEU 169 0.1980 12.2364 20.2700
1328 CA PRO 170 0.2789 12.3642 21.1700
1335 CA ASN 171 0.1250 12.1211 9.0200
1343 CA VAL 172 0.0785 12.0476 9.9700
1350 CA SER 173 0.0780 12.0468 10.9100
1356 CA TRP 174 0.0558 12.0117 8.2800
1370 CA ARG 175 0.0571 12.0137 9.6000
1381 CA ILE 176 0.0354 11.9794 10.9200
1389 CA ILE 177 0.0435 11.9923 8.4400
1397 CA ASN 178 0.0475 11.9986 9.9500
1405 CA ASP 179 0.0454 11.9952 12.4400
1413 CA GLN 180 0.0951 12.0737 12.0300
1422 CA GLY 181 0.0683 12.0315 11.3700
1426 CA GLY 182 0.1072 12.0929 13.0100
1430 CA LEU 183 0.0942 12.0724 15.6200
1438 CA ASP 184 0.0801 12.0500 14.4000
1446 CA ARG 185 0.1060 12.0910 13.4500
1457 CA LEU 186 0.0982 12.0787 10.9900
1465 CA TYR 187 0.0744 12.0410 11.6400
1477 CA SER 188 0.0852 12.0582 15.0300
1483 CA LYS 189 0.0823 12.0535 17.3700
1492 CA ASN 190 0.1271 12.1243 21.1900
1500 CA VAL 191 0.1062 12.0914 21.4900

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.