Should you encounter any unexpected behaviour,
please let us know.

* 3CYE *

B-factor analysis for ID 240228061031935674

Overall B-factor prediction

Correlation= 0.523 for 333 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA VAL 83 0.0322 13.7875 28.3200
9 CA ILE 84 0.0196 11.6280 23.0400
17 CA LEU 85 0.0133 10.5445 15.5900
25 CA THR 86 0.0152 10.8689 16.4900
32 CA GLY 87 0.0130 10.4951 15.4900
36 CA ASN 88 0.0246 12.4766 15.5800
44 CA SER 89 0.0271 12.9068 13.3300
50 CA SER 90 0.0353 14.3072 12.7800
56 CA LEU 91 0.0350 14.2569 11.1000
64 CA CYS 92 0.0776 21.5670 12.4800
70 CA PRO 93 0.0936 24.3149 12.4800
77 CA ILE 94 0.0500 16.8337 11.0100
85 CA SER 95 0.0626 18.9903 9.6500
91 CA GLY 96 0.0394 15.0162 9.1700
95 CA TRP 97 0.0327 13.8705 8.9400
109 CA ALA 98 0.0717 20.5610 7.4200
114 CA ILE 99 0.1015 25.6714 8.9500
122 CA TYR 100 0.0517 17.1264 9.2800
134 CA SER 101 0.0933 24.2552 7.7300
140 CA LYS 102 0.0927 24.1587 8.0300
149 CA ASP 103 0.0572 18.0637 8.5500
157 CA ASN 104 0.0883 23.4075 9.7400
165 CA GLY 105 0.0605 18.6433 10.0200
169 CA ILE 106 0.0770 21.4693 11.0200
177 CA ARG 107 0.1226 29.2831 11.4200
188 CA ILE 108 0.0836 22.5897 10.7300
196 CA GLY 109 0.0594 18.4466 11.6800
200 CA SER 110 0.1020 25.7492 14.6200
206 CA LYS 111 0.1272 30.0763 15.2700
215 CA GLY 112 0.0959 24.7001 13.9500
219 CA ASP 113 0.0462 16.1906 10.8700
227 CA VAL 114 0.0272 12.9266 11.2300
234 CA PHE 115 0.0170 11.1753 10.1200
245 CA VAL 116 0.0217 11.9810 11.5600
252 CA ILE 117 0.0129 10.4697 11.0200
260 CA ARG 118 0.0122 10.3558 11.9000
271 CA GLU 119 0.0081 9.6446 15.0800
280 CA PRO 120 0.0084 9.7025 13.7100
287 CA PHE 121 0.0074 9.5411 9.9700
298 CA ILE 122 0.0078 9.6086 10.0400
306 CA SER 123 0.0071 9.4822 9.7700
312 CA CYS 124 0.0082 9.6636 11.4100
318 CA SER 125 0.0125 10.4041 13.3900
324 CA HIS 126 0.0171 11.2033 15.2400
334 CA LEU 127 0.0310 13.5797 16.7100
342 CA GLU 128 0.0202 11.7291 16.8600
351 CA CYS 129 0.0114 10.2208 15.3500
357 CA ARG 130 0.0099 9.9558 11.2800
368 CA THR 131 0.0087 9.7563 8.6200
375 CA PHE 132 0.0069 9.4507 7.8200
386 CA PHE 133 0.0074 9.5356 8.6300
397 CA LEU 134 0.0072 9.5058 10.1600
405 CA THR 135 0.0115 10.2385 15.7600
412 CA GLN 136 0.0159 10.9884 22.0500
421 CA GLY 137 0.0233 12.2564 19.3900
425 CA ALA 138 0.0295 13.3240 15.5400
430 CA LEU 139 0.0328 13.8882 14.2900
438 CA LEU 140 0.0432 15.6631 18.3600
446 CA ASN 141 0.1061 26.4467 22.7900
454 CA ASP 142 0.0898 23.6669 20.6100
462 CA LYS 143 0.1423 32.6666 21.1600
471 CA HIS 144 0.0916 23.9744 20.2700
481 CA SER 145 0.0719 20.5951 22.9100
487 CA ASN 146 0.1230 29.3462 29.1800
495 CA GLY 147 0.1504 34.0533 35.1000
499 CA THR 148 0.2183 45.6945 40.5300
506 CA VAL 149 0.0742 20.9787 41.2100
513 CA LYS 150 0.0612 18.7567 37.4400
522 CA ASP 151 0.0339 14.0784 30.7800
530 CA ARG 152 0.0208 11.8285 20.8200
541 CA SER 153 0.0252 12.5914 15.9400
547 CA PRO 154 0.0308 13.5453 14.9100
554 CA TYR 155 0.0273 12.9489 12.9900
566 CA ARG 156 0.0141 10.6814 12.4100
577 CA THR 157 0.0087 9.7488 10.2200
584 CA LEU 158 0.0067 9.4131 7.7300
592 CA MET 159 0.0081 9.6461 10.2200
600 CA SER 160 0.0086 9.7393 8.2800
606 CA CYS 161 0.0122 10.3485 8.7200
612 CA PRO 162 0.0176 11.2850 10.1000
619 CA VAL 163 0.0196 11.6293 10.7800
626 CA GLY 164 0.0324 13.8259 11.6100
630 CA GLU 165 0.0325 13.8337 10.6200
639 CA ALA 166 0.0336 14.0287 10.3100
644 CA PRO 167 0.0166 11.1020 10.4900
651 CA SER 168 0.0209 11.8534 6.7000
652 CA SER 168 0.0226 12.1461 14.8900
660 CA PRO 169 0.0355 14.3528 9.8400
667 CA TYR 169 0.0484 16.5655 11.1700
679 CA ASN 170 0.0322 13.7796 10.7000
687 CA SER 171 0.0140 10.6682 10.8100
693 CA ARG 172 0.0136 10.6028 11.5600
704 CA PHE 173 0.0125 10.4017 8.1400
715 CA GLU 174 0.0101 9.9939 7.9600
724 CA SER 175 0.0091 9.8188 9.8600
730 CA VAL 176 0.0098 9.9414 8.2800
737 CA ALA 177 0.0088 9.7793 9.7700
742 CA TRP 178 0.0093 9.8661 9.5900
756 CA SER 179 0.0057 9.2338 7.2300
762 CA ALA 180 0.0044 9.0228 7.6200
767 CA SER 181 0.0040 8.9464 8.5100
773 CA ALA 182 0.0040 8.9510 8.4200
778 CA CYS 183 0.0058 9.2598 9.2700
784 CA HIS 184 0.0068 9.4262 10.2500
794 CA ASP 185 0.0094 9.8703 10.1100
802 CA GLY 186 0.0131 10.5030 12.7500
806 CA MET 187 0.0223 12.0795 17.8600
814 CA GLY 188 0.0160 11.0066 12.3900
818 CA TRP 189 0.0069 9.4415 8.8700
832 CA LEU 190 0.0062 9.3247 7.6500
840 CA THR 191 0.0055 9.2109 7.7800
847 CA ILE 192 0.0052 9.1577 8.0900
855 CA GLY 193 0.0065 9.3853 7.7500
859 CA ILE 194 0.0066 9.4012 9.0600
867 CA SER 195 0.0116 10.2606 9.0600
873 CA GLY 196 0.0170 11.1785 10.1800
877 CA PRO 197 0.0286 13.1626 12.3500
884 CA ASP 198 0.0222 12.0685 13.6000
892 CA ASN 199 0.0295 13.3202 14.9700
900 CA GLY 200 0.0224 12.0994 11.2800
904 CA ALA 201 0.0119 10.2979 8.0700
909 CA VAL 202 0.0121 10.3429 9.2200
916 CA ALA 203 0.0104 10.0396 9.5100
921 CA VAL 204 0.0099 9.9611 8.2400
928 CA LEU 205 0.0096 9.9183 8.0600
936 CA LYS 206 0.0103 10.0319 9.0700
945 CA TYR 207 0.0133 10.5401 9.9400
957 CA ASN 208 0.0224 12.1076 11.5300
965 CA GLY 209 0.0302 13.4423 11.4900
969 CA ILE 210 0.0374 14.6729 10.2200
977 CA ILE 211 0.0239 12.3570 9.2000
985 CA THR 212 0.0197 11.6339 10.1700
992 CA ASP 213 0.0161 11.0157 8.9300
1000 CA THR 214 0.0167 11.1284 9.6500
1007 CA ILE 215 0.0137 10.6139 12.1100
1015 CA LYS 216 0.0153 10.8891 12.3300
1024 CA SER 217 0.0123 10.3800 10.7300
1030 CA TRP 218 0.0150 10.8286 12.7300
1044 CA ARG 219 0.0171 11.2033 13.8900
1055 CA ASN 220 0.0218 12.0061 14.3500
1063 CA ASN 221 0.0147 10.7780 12.2600
1071 CA ILE 222 0.0123 10.3731 11.3000
1079 CA LEU 223 0.0066 9.4032 9.0100
1087 CA ARG 224 0.0070 9.4668 8.5600
1098 CA THR 225 0.0040 8.9512 8.4500
1105 CA GLN 226 0.0037 8.8928 7.6000
1114 CA GLU 227 0.0042 8.9771 8.5000
1123 CA SER 228 0.0042 8.9860 8.1600
1129 CA GLU 229 0.0041 8.9596 8.3800
1138 CA CYS 230 0.0040 8.9462 9.5800
1144 CA ALA 231 0.0049 9.0994 9.2800
1149 CA CYS 232 0.0053 9.1769 11.1000
1155 CA VAL 233 0.0090 9.8049 12.7400
1162 CA ASN 234 0.0136 10.6024 15.1400
1170 CA GLY 235 0.0123 10.3685 14.5000
1174 CA SER 236 0.0101 9.9943 13.9600
1180 CA CYS 237 0.0058 9.2642 11.4600
1186 CA PHE 238 0.0054 9.1974 9.8600
1197 CA THR 239 0.0040 8.9449 9.9600
1204 CA ILE 240 0.0036 8.8796 10.9800
1212 CA MET 241 0.0048 9.0906 10.7400
1220 CA THR 242 0.0053 9.1800 8.7200
1227 CA ASP 243 0.0088 9.7732 10.1800
1235 CA GLY 244 0.0112 10.1791 11.6600
1239 CA PRO 245 0.0149 10.8110 13.3200
1246 CA SER 246 0.0156 10.9389 16.2300
1252 CA ASN 247 0.0249 12.5386 16.1200
1260 CA GLY 248 0.0199 11.6731 13.4100
1264 CA GLN 249 0.0133 10.5503 12.5100
1273 CA ALA 250 0.0113 10.2049 11.7300
1278 CA SER 251 0.0073 9.5116 9.5100
1284 CA TYR 252 0.0070 9.4677 9.1000
1296 CA LYS 253 0.0070 9.4608 10.6400
1305 CA ILE 254 0.0068 9.4301 10.0100
1313 CA LEU 255 0.0072 9.5053 9.2100
1321 CA LYS 256 0.0073 9.5194 9.3100
1330 CA ILE 257 0.0088 9.7784 9.9900
1338 CA GLU 258 0.0124 10.3828 11.4400
1347 CA LYS 259 0.0158 10.9744 12.1300
1356 CA GLY 260 0.0124 10.3974 10.1700
1360 CA LYS 261 0.0147 10.7910 11.2200
1369 CA VAL 262 0.0146 10.7717 10.1700
1376 CA THR 263 0.0180 11.3522 12.2500
1383 CA LYS 264 0.0157 10.9574 12.5900
1392 CA SER 265 0.0132 10.5259 12.2400
1398 CA ILE 266 0.0127 10.4448 12.2800
1406 CA GLU 267 0.0114 10.2208 11.0900
1415 CA LEU 268 0.0097 9.9288 11.2800
1423 CA ASN 269 0.0284 13.1383 12.3000
1431 CA ALA 270 0.0123 10.3718 12.9700
1436 CA PRO 271 0.0271 12.9027 14.4900
1443 CA ASN 272 0.0160 11.0098 14.3200
1451 CA TYR 273 0.0076 9.5748 12.1100
1463 CA HIS 274 0.0067 9.4134 10.8400
1473 CA TYR 275 0.0047 9.0721 10.0600
1485 CA GLU 276 0.0058 9.2533 9.5300
1494 CA GLU 277 0.0044 9.0147 8.3200
1503 CA CYS 278 0.0039 8.9274 9.7600
1509 CA SER 279 0.0038 8.9235 8.2400
1515 CA CYS 280 0.0038 8.9079 8.6600
1521 CA TYR 281 0.0056 9.2269 7.7800
1533 CA PRO 282 0.0062 9.3261 9.0600
1540 CA ASP 283 0.0126 10.4313 11.6200
1548 CA THR 284 0.0204 11.7593 13.0300
1555 CA GLY 285 0.0140 10.6672 12.7500
1559 CA LYS 286 0.0102 10.0129 12.0300
1568 CA VAL 287 0.0055 9.2042 7.9100
1575 CA MET 288 0.0048 9.0895 8.6800
1583 CA CYS 289 0.0038 8.9168 7.8900
1589 CA VAL 290 0.0037 8.8980 9.2700
1596 CA CYS 291 0.0044 9.0190 8.7600
1602 CA ARG 292 0.0048 9.0828 9.7500
1613 CA ASP 293 0.0069 9.4403 10.0900
1621 CA ASN 294 0.0095 9.8865 10.4500
1629 CA TRP 295 0.0123 10.3801 11.2500
1643 CA HIS 296 0.0127 10.4332 11.9900
1653 CA GLY 297 0.0094 9.8686 10.5500
1657 CA SER 298 0.0088 9.7791 11.1800
1663 CA ASN 299 0.0055 9.2111 11.0100
1671 CA ARG 300 0.0046 9.0551 10.5600
1682 CA PRO 301 0.0048 9.0898 10.1400
1689 CA TRP 302 0.0050 9.1297 10.1400
1703 CA VAL 303 0.0056 9.2293 9.8800
1710 CA SER 304 0.0069 9.4543 10.4000
1716 CA PHE 305 0.0092 9.8417 9.6400
1727 CA ASP 306 0.0120 10.3270 11.7400
1735 CA GLN 308 0.0123 10.3805 12.8100
1744 CA ASN 309 0.0199 11.6699 11.9400
1745 CA ASN 309 0.0259 12.7000 20.7100
1757 CA LEU 310 0.0116 10.2526 10.9700
1765 CA ASP 311 0.0186 11.4597 12.5100
1773 CA TYR 312 0.0120 10.3177 10.5600
1785 CA GLN 313 0.0137 10.6111 12.4500
1794 CA ILE 314 0.0076 9.5731 10.2100
1802 CA GLY 315 0.0075 9.5548 11.8000
1806 CA TYR 316 0.0059 9.2690 10.9600
1818 CA ILE 317 0.0058 9.2583 9.8000
1826 CA CYS 318 0.0111 10.1606 11.7100
1832 CA SER 319 0.0104 10.0429 11.8000
1838 CA GLY 320 0.0140 10.6560 10.6200
1842 CA VAL 321 0.0117 10.2753 12.1900
1849 CA PHE 322 0.0085 9.7155 11.8600
1860 CA GLY 323 0.0073 9.5159 10.8800
1864 CA ASP 324 0.0078 9.6066 11.6500
1872 CA ASN 325 0.0107 10.0983 11.2800
1880 CA PRO 326 0.0149 10.8115 13.1900
1887 CA ARG 327 0.0133 10.5445 13.3300
1898 CA PRO 328 0.0227 12.1478 15.1300
1905 CA ASN 329 0.0330 13.9210 16.1400
1913 CA ASP 330 0.0214 11.9261 15.6200
1921 CA GLY 331 0.0274 12.9539 17.4000
1925 CA THR 332 0.0315 13.6628 18.9700
1932 CA GLY 333 0.0161 11.0285 17.8000
1936 CA SER 335 0.0139 10.6511 15.9100
1942 CA CYS 336 0.0130 10.5002 18.0500
1948 CA GLY 339 0.0111 10.1584 15.4800
1952 CA PRO 340 0.0098 9.9502 14.1400
1959 CA VAL 341 0.0135 10.5838 13.4000
1966 CA SER 342 0.0194 11.5942 14.1000
1972 CA SER 343 0.0288 13.1962 12.4000
1973 CA SER 343 0.0337 14.0477 25.9000
1981 CA ASN 344 0.0236 12.3183 14.3500
1989 CA GLY 345 0.0136 10.6016 12.9300
1993 CA ALA 346 0.0154 10.9050 13.3500
1998 CA ASN 347 0.0137 10.6205 13.6300
2006 CA GLY 348 0.0095 9.9007 10.5700
2010 CA ILE 349 0.0082 9.6648 9.3300
2018 CA LYS 350 0.0062 9.3246 7.8100
2027 CA GLY 351 0.0054 9.1844 8.0500
2031 CA PHE 352 0.0049 9.1089 7.5100
2042 CA SER 353 0.0056 9.2159 8.7800
2048 CA PHE 354 0.0063 9.3399 8.8700
2059 CA ARG 355 0.0100 9.9738 11.2500
2070 CA TYR 356 0.0131 10.5182 11.1500
2082 CA ASP 357 0.0390 14.9529 13.6400
2090 CA ASN 358 0.0219 12.0242 11.1300
2098 CA GLY 359 0.0124 10.3908 9.8400
2102 CA VAL 360 0.0089 9.7814 10.1900
2109 CA TRP 361 0.0089 9.7902 8.7000
2123 CA ILE 362 0.0079 9.6230 10.2300
2131 CA GLY 363 0.0096 9.9095 9.6300
2135 CA ARG 364 0.0103 10.0257 9.3800
2146 CA THR 365 0.0157 10.9535 10.6700
2153 CA LYS 366 0.0204 11.7650 13.1000
2162 CA SER 367 0.0250 12.5433 14.2300
2168 CA THR 368 0.0220 12.0309 15.8600
2175 CA SER 369 0.0357 14.3859 17.3200
2181 CA SER 370 0.0350 14.2562 16.4300
2187 CA ARG 371 0.0222 12.0674 13.7500
2198 CA SER 372 0.0305 13.4985 12.6100
2204 CA GLY 373 0.0276 12.9942 11.5700
2208 CA PHE 374 0.0202 11.7262 9.3100
2219 CA GLU 375 0.0170 11.1747 8.8100
2228 CA MET 376 0.0142 10.6993 8.6200
2236 CA ILE 377 0.0131 10.5174 10.3400
2244 CA TRP 378 0.0128 10.4546 9.7000
2258 CA ASP 379 0.0138 10.6300 10.1500
2266 CA PRO 380 0.0181 11.3614 10.5000
2273 CA ASN 381 0.0187 11.4696 9.5800
2281 CA GLY 382 0.0119 10.3016 10.3100
2285 CA TRP 383 0.0095 9.8863 11.3900
2299 CA THR 384 0.0164 11.0745 12.4500
2306 CA GLU 385 0.0218 11.9929 12.9400
2315 CA THR 386 0.0198 11.6609 12.8700
2322 CA ASP 387 0.0245 12.4669 13.7000
2330 CA SER 388 0.0222 12.0695 15.3700
2336 CA SER 389 0.0251 12.5641 15.7000
2342 CA PHE 390 0.0206 11.7915 14.3400
2353 CA SER 391 0.0291 13.2575 15.9300
2359 CA VAL 392 0.0250 12.5559 14.0500
2366 CA ARG 394 0.0245 12.4679 13.3600
2377 CA GLN 395 0.0257 12.6623 10.3500
2386 CA ASP 396 0.0378 14.7483 11.7500
2394 CA ILE 397 0.0409 15.2721 9.3800
2402 CA VAL 398 0.0482 16.5351 10.2800
2409 CA ALA 399 0.0568 18.0037 12.1800
2414 CA ILE 400 0.0509 16.9816 13.8100
2422 CA THR 401 0.0924 24.1057 15.7400
2429 CA ASP 402 0.0773 21.5150 13.9000
2437 CA TRP 403 0.0662 19.6042 12.8900
2451 CA SER 404 0.0322 13.7857 11.2100
2457 CA GLY 405 0.0236 12.3100 10.4600
2461 CA TYR 406 0.0101 9.9974 9.1200
2473 CA SER 407 0.0097 9.9261 8.6600
2479 CA GLY 408 0.0059 9.2830 9.3900
2483 CA SER 409 0.0056 9.2234 9.5500
2489 CA PHE 410 0.0086 9.7403 9.3900
2500 CA VAL 411 0.0090 9.8081 9.6000
2507 CA GLN 412 0.0231 12.2290 8.2100
2516 CA HIS 412 0.0176 11.2777 10.3500
2526 CA PRO 412 0.0260 12.7189 11.7300
2533 CA GLU 412 0.0256 12.6594 13.5700
2542 CA LEU 412 0.0248 12.5080 11.1000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.