CNRS Nantes University US2B US2B
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B-factor analysis for ID 240227210820858749

Overall B-factor prediction

%Bfactors-Wn> Experimental B-factors are nearly constant !

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     5 CA   GLU    338      0.0321      0.0000      0.0000
    20 CA   VAL    339      0.0286      0.0000      0.0000
    36 CA   ASN    340      0.0138      0.0000      0.0000
    50 CA   LEU    341      0.0082      0.0000      0.0000
    69 CA   ASP    342      0.0138      0.0000      0.0000
    81 CA   ARG    343      0.0143      0.0000      0.0000
   105 CA   TYR    344      0.0047      0.0000      0.0000
   126 CA   GLN    345      0.0055      0.0000      0.0000
   143 CA   THR    346      0.0119      0.0000      0.0000
   157 CA   ALA    347      0.0072      0.0000      0.0000
   167 CA   LEU    348      0.0047      0.0000      0.0000
   186 CA   GLU    349      0.0087      0.0000      0.0000
   201 CA   GLU    350      0.0108      0.0000      0.0000
   216 CA   VAL    351      0.0069      0.0000      0.0000
   232 CA   LEU    352      0.0070      0.0000      0.0000
   251 CA   SER    353      0.0111      0.0000      0.0000
   262 CA   TRP    354      0.0087      0.0000      0.0000
   286 CA   LEU    355      0.0076      0.0000      0.0000
   305 CA   LEU    356      0.0105      0.0000      0.0000
   324 CA   SER    357      0.0121      0.0000      0.0000
   335 CA   ALA    358      0.0084      0.0000      0.0000
   345 CA   GLU    359      0.0093      0.0000      0.0000
   360 CA   ASP    360      0.0153      0.0000      0.0000
   372 CA   THR    361      0.0113      0.0000      0.0000
   386 CA   LEU    362      0.0081      0.0000      0.0000
   405 CA   GLN    363      0.0231      0.0000      0.0000
   422 CA   ALA    364      0.0307      0.0000      0.0000
   432 CA   GLN    365      0.0141      0.0000      0.0000
   449 CA   GLY    366      0.0477      0.0000      0.0000
   456 CA   GLU    367      0.0365      0.0000      0.0000
   471 CA   ILE    368      0.0104      0.0000      0.0000
   490 CA   SER    369      0.0180      0.0000      0.0000
   501 CA   ASN    370      0.0368      0.0000      0.0000
   515 CA   ASP    371      0.0323      0.0000      0.0000
   527 CA   VAL    372      0.0198      0.0000      0.0000
   543 CA   GLU    373      0.0271      0.0000      0.0000
   558 CA   VAL    374      0.0201      0.0000      0.0000
   574 CA   VAL    375      0.0087      0.0000      0.0000
   590 CA   LYS    376      0.0117      0.0000      0.0000
   612 CA   ASP    377      0.0164      0.0000      0.0000
   624 CA   GLN    378      0.0074      0.0000      0.0000
   641 CA   PHE    379      0.0055      0.0000      0.0000
   661 CA   HSD    380      0.0130      0.0000      0.0000
   678 CA   THR    381      0.0109      0.0000      0.0000
   692 CA   HSD    382      0.0056      0.0000      0.0000
   709 CA   GLU    383      0.0105      0.0000      0.0000
   724 CA   GLY    384      0.0169      0.0000      0.0000
   731 CA   TYR    385      0.0077      0.0000      0.0000
   752 CA   MET    386      0.0083      0.0000      0.0000
   769 CA   MET    387      0.0175      0.0000      0.0000
   786 CA   ASP    388      0.0117      0.0000      0.0000
   798 CA   LEU    389      0.0083      0.0000      0.0000
   817 CA   THR    390      0.0128      0.0000      0.0000
   831 CA   ALA    391      0.0147      0.0000      0.0000
   841 CA   HSD    392      0.0091      0.0000      0.0000
   858 CA   GLN    393      0.0098      0.0000      0.0000
   875 CA   GLY    394      0.0133      0.0000      0.0000
   882 CA   ARG    395      0.0095      0.0000      0.0000
   906 CA   VAL    396      0.0067      0.0000      0.0000
   922 CA   GLY    397      0.0095      0.0000      0.0000
   929 CA   ASN    398      0.0102      0.0000      0.0000
   943 CA   ILE    399      0.0047      0.0000      0.0000
   962 CA   LEU    400      0.0058      0.0000      0.0000
   981 CA   GLN    401      0.0108      0.0000      0.0000
   998 CA   LEU    402      0.0060      0.0000      0.0000
  1017 CA   GLY    403      0.0038      0.0000      0.0000
  1024 CA   SER    404      0.0085      0.0000      0.0000
  1035 CA   LYS    405      0.0137      0.0000      0.0000
  1057 CA   LEU    406      0.0073      0.0000      0.0000
  1076 CA   ILE    407      0.0099      0.0000      0.0000
  1095 CA   GLY    408      0.0245      0.0000      0.0000
  1102 CA   THR    409      0.0283      0.0000      0.0000
  1116 CA   GLY    410      0.0363      0.0000      0.0000
  1123 CA   LYS    411      0.0359      0.0000      0.0000
  1145 CA   LEU    412      0.0167      0.0000      0.0000
  1164 CA   SER    413      0.0352      0.0000      0.0000
  1175 CA   GLU    414      0.0405      0.0000      0.0000
  1190 CA   LEU    415      0.0293      0.0000      0.0000
  1209 CA   GLU    416      0.0133      0.0000      0.0000
  1224 CA   GLU    417      0.0109      0.0000      0.0000
  1239 CA   THR    418      0.0165      0.0000      0.0000
  1253 CA   GLU    419      0.0096      0.0000      0.0000
  1268 CA   VAL    420      0.0043      0.0000      0.0000
  1284 CA   GLN    421      0.0082      0.0000      0.0000
  1301 CA   GLU    422      0.0109      0.0000      0.0000
  1316 CA   GLN    423      0.0055      0.0000      0.0000
  1333 CA   MET    424      0.0055      0.0000      0.0000
  1350 CA   ASN    425      0.0110      0.0000      0.0000
  1364 CA   LEU    426      0.0083      0.0000      0.0000
  1383 CA   LEU    427      0.0059      0.0000      0.0000
  1402 CA   ASN    428      0.0085      0.0000      0.0000
  1416 CA   SER    429      0.0122      0.0000      0.0000
  1427 CA   ARG    430      0.0088      0.0000      0.0000
  1451 CA   TRP    431      0.0076      0.0000      0.0000
  1475 CA   GLU    432      0.0112      0.0000      0.0000
  1490 CA   CYS    433      0.0114      0.0000      0.0000
  1501 CA   LEU    434      0.0077      0.0000      0.0000
  1520 CA   ARG    435      0.0085      0.0000      0.0000
  1544 CA   VAL    436      0.0114      0.0000      0.0000
  1560 CA   ALA    437      0.0090      0.0000      0.0000
  1570 CA   SER    438      0.0066      0.0000      0.0000
  1581 CA   MET    439      0.0098      0.0000      0.0000
  1598 CA   GLU    440      0.0114      0.0000      0.0000
  1613 CA   LYS    441      0.0060      0.0000      0.0000
  1635 CA   GLN    442      0.0060      0.0000      0.0000
  1652 CA   SER    443      0.0116      0.0000      0.0000
  1663 CA   ASN    444      0.0100      0.0000      0.0000
  1677 CA   LEU    445      0.0044      0.0000      0.0000
  1696 CA   HSD    446      0.0094      0.0000      0.0000
  1713 CA   ARG    447      0.0167      0.0000      0.0000
  1737 CA   VAL    448      0.0121      0.0000      0.0000
  1753 CA   LEU    449      0.0122      0.0000      0.0000
  1772 CA   MET    450      0.0283      0.0000      0.0000
  1789 CA   ASP    451      0.0327      0.0000      0.0000
  1801 CA   LEU    452      0.0274      0.0000      0.0000
  1820 CA   GLN    453      0.0284      0.0000      0.0000

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.