Should you encounter any unexpected behaviour,
please let us know.

* 1P5V_unrelaxed_rank_001_alphafold2_ptm_model_4_seed_000 *

B-factor analysis for ID 240220090321150899

Overall B-factor prediction

Correlation= -0.498 for 196 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA PHE 1 4.0078 258.8812 31.6600
13 CA ALA 2 1.5427 148.5421 28.8900
18 CA SER 3 0.5944 106.0945 32.7800
24 CA LYS 4 0.2514 90.7429 38.4400
33 CA GLU 5 0.1820 87.6325 48.8400
42 CA TYR 6 0.0733 82.7687 51.1600
54 CA GLY 7 0.0597 82.1610 61.8400
58 CA VAL 8 0.0295 80.8082 63.7800
65 CA THR 9 0.0395 81.2577 74.5600
72 CA ILE 10 0.0299 80.8245 75.0000
80 CA GLY 11 0.0449 81.4988 68.2500
84 CA GLU 12 0.0382 81.1998 75.9400
93 CA SER 13 0.0432 81.4226 83.1900
99 CA ARG 14 0.0285 80.7624 88.8100
110 CA ILE 15 0.0199 80.3782 89.6900
118 CA ILE 16 0.0172 80.2593 90.5600
126 CA TYR 17 0.0167 80.2337 90.0600
138 CA PRO 18 0.0218 80.4615 87.9400
145 CA LEU 19 0.0221 80.4748 84.6200
153 CA ASP 20 0.0428 81.4042 74.1200
161 CA ALA 21 0.1598 86.6392 57.5000
166 CA ALA 22 0.2619 91.2093 55.5600
171 CA GLY 23 0.0934 83.6697 53.3800
175 CA VAL 24 0.0439 81.4523 51.9400
182 CA MET 25 0.0338 81.0019 56.5900
190 CA VAL 26 0.0360 81.1002 56.9700
197 CA SER 27 0.0254 80.6249 64.6200
203 CA SER 28 0.0343 81.0247 69.6200
209 CA VAL 29 0.0263 80.6648 78.8800
216 CA VAL 30 0.0331 80.9676 83.9400
223 CA VAL 31 0.0252 80.6158 85.3800
230 CA LYS 32 0.0352 81.0620 87.1200
239 CA ASN 33 0.0365 81.1225 86.6200
247 CA THR 34 0.0590 82.1297 85.0000
254 CA GLN 35 0.0601 82.1786 83.5000
263 CA ASP 36 0.0962 83.7957 85.6900
271 CA TYR 37 0.0763 82.9040 85.7500
283 CA PRO 38 0.0572 82.0484 87.5000
290 CA VAL 39 0.0354 81.0737 87.3800
297 CA LEU 40 0.0339 81.0061 90.0600
305 CA ILE 41 0.0224 80.4906 89.8800
313 CA GLN 42 0.0268 80.6864 91.9400
322 CA SER 43 0.0217 80.4592 91.6900
328 CA ARG 44 0.0286 80.7684 92.6900
339 CA ILE 45 0.0255 80.6281 92.6200
347 CA TYR 46 0.0381 81.1936 90.5000
359 CA ASP 47 0.0417 81.3524 90.7500
367 CA PRO 48 0.0834 83.2191 88.2500
374 CA PHE 49 0.0460 81.5450 90.0600
385 CA VAL 50 0.0265 80.6760 90.0000
392 CA VAL 51 0.0313 80.8872 90.3800
399 CA VAL 52 0.0240 80.5628 90.8100
406 CA THR 53 0.0322 80.9308 90.0600
413 CA PRO 54 0.0362 81.1078 91.6900
420 CA PRO 55 0.0351 81.0589 92.0000
427 CA LEU 56 0.0397 81.2639 92.5000
435 CA PHE 57 0.0390 81.2322 92.0000
446 CA ARG 58 0.0496 81.7087 91.1900
457 CA LEU 59 0.0391 81.2392 90.3800
465 CA ASP 60 0.0639 82.3483 91.2500
473 CA ALA 61 0.0671 82.4899 88.9400
478 CA LYS 62 0.0766 82.9185 86.5600
487 CA GLN 63 0.0665 82.4624 89.1900
496 CA GLN 64 0.0513 81.7827 85.0600
505 CA ASN 65 0.0375 81.1675 76.1900
513 CA SER 66 0.0412 81.3301 71.3800
519 CA SER 67 0.0391 81.2374 78.0000
525 CA LEU 68 0.0243 80.5764 86.4400
533 CA ARG 69 0.0272 80.7048 87.8100
544 CA ILE 70 0.0199 80.3773 88.4400
552 CA ALA 71 0.0260 80.6522 87.1200
557 CA GLN 72 0.0308 80.8667 87.1900
566 CA ALA 73 0.0625 82.2850 86.7500
571 CA GLY 74 0.0697 82.6072 86.1200
575 CA GLY 75 0.0689 82.5728 85.3800
579 CA VAL 76 0.0749 82.8410 88.1200
586 CA PHE 77 0.0322 80.9287 90.6900
597 CA PRO 78 0.0377 81.1767 93.2500
604 CA ARG 79 0.0371 81.1482 92.3800
615 CA ASP 80 0.0417 81.3534 94.4400
623 CA LYS 81 0.0230 80.5181 95.9400
632 CA GLU 82 0.0156 80.1875 96.1200
641 CA SER 83 0.0183 80.3054 95.3100
647 CA LEU 84 0.0182 80.3030 95.0000
655 CA LYS 85 0.0225 80.4965 94.3800
664 CA TRP 86 0.0246 80.5884 93.7500
678 CA LEU 87 0.0205 80.4074 91.8100
686 CA CYS 88 0.0252 80.6137 91.5600
692 CA VAL 89 0.0203 80.3977 89.4400
699 CA LYS 90 0.0278 80.7325 88.0600
708 CA GLY 91 0.0280 80.7432 86.6900
712 CA ILE 92 0.0438 81.4498 85.5600
720 CA PRO 93 0.0586 82.1102 79.7500
727 CA LYS 94 0.1124 84.5185 73.1900
736 CA ASP 95 0.2138 89.0588 68.9400
744 CA VAL 96 0.2541 90.8593 55.7200
751 CA GLY 97 0.5612 104.6061 54.8100
755 CA VAL 98 0.5481 104.0233 47.9700
762 CA PHE 99 0.3761 96.3214 49.7800
773 CA VAL 100 0.2250 89.5575 51.6200
780 CA GLN 101 0.2015 88.5052 48.3100
789 CA PHE 102 0.1165 84.7022 54.2800
800 CA ALA 103 0.0678 82.5209 57.6900
805 CA ILE 104 0.0505 81.7474 65.5000
813 CA ASN 105 0.0456 81.5311 71.6900
821 CA ASN 106 0.0382 81.1968 83.8100
829 CA CYS 107 0.0327 80.9535 89.6900
835 CA ILE 108 0.0285 80.7623 90.5000
843 CA LYS 109 0.0232 80.5243 92.4400
852 CA LEU 110 0.0179 80.2891 93.0000
860 CA LEU 111 0.0149 80.1527 93.6900
868 CA VAL 112 0.0142 80.1221 93.4400
875 CA ARG 113 0.0157 80.1888 93.3800
886 CA PRO 114 0.0223 80.4868 92.1200
893 CA ASN 115 0.0396 81.2617 89.0600
901 CA GLU 116 0.0524 81.8323 90.8100
910 CA LEU 117 0.0348 81.0466 92.4400
918 CA LYS 118 0.0751 82.8473 90.7500
927 CA GLY 119 0.0507 81.7570 91.3100
931 CA THR 120 0.0316 80.9014 92.5000
938 CA PRO 121 0.0188 80.3279 94.0000
945 CA ILE 122 0.0277 80.7283 94.1200
953 CA GLN 123 0.0406 81.3064 94.0000
962 CA PHE 124 0.0257 80.6371 94.6200
973 CA ALA 125 0.0200 80.3848 93.1200
978 CA GLU 126 0.0318 80.9128 93.3100
987 CA ASN 127 0.0313 80.8867 94.0000
995 CA LEU 128 0.0198 80.3726 94.6900
1003 CA SER 129 0.0309 80.8723 93.6900
1009 CA TRP 130 0.0328 80.9575 91.7500
1023 CA LYS 131 0.0588 82.1202 90.5600
1032 CA VAL 132 0.0775 82.9582 87.5600
1039 CA ASP 133 0.1367 85.6068 85.6900
1047 CA GLY 134 0.2909 92.5075 84.5000
1051 CA GLY 135 0.1496 86.1856 82.8800
1055 CA LYS 136 0.0919 83.6030 84.1900
1064 CA LEU 137 0.0515 81.7945 86.8100
1072 CA ILE 138 0.0431 81.4185 90.7500
1080 CA ALA 139 0.0251 80.6103 93.1900
1085 CA GLU 140 0.0270 80.6951 96.0600
1094 CA ASN 141 0.0197 80.3698 97.6900
1102 CA PRO 142 0.0303 80.8452 96.3100
1109 CA SER 143 0.0231 80.5202 97.0000
1115 CA PRO 144 0.0215 80.4497 97.1900
1122 CA PHE 145 0.0145 80.1364 97.5600
1133 CA TYR 146 0.0130 80.0694 97.1200
1145 CA MET 147 0.0117 80.0115 96.7500
1153 CA ASN 148 0.0173 80.2611 93.8800
1161 CA ILE 149 0.0236 80.5426 93.0000
1169 CA GLY 150 0.0424 81.3840 89.6900
1173 CA GLU 151 0.0498 81.7187 91.5000
1182 CA LEU 152 0.0428 81.4029 90.5000
1190 CA THR 153 0.0609 82.2131 88.1900
1197 CA PHE 154 0.0649 82.3934 81.9400
1208 CA GLY 155 0.1120 84.4990 82.6900
1212 CA GLY 156 0.1491 86.1603 82.4400
1216 CA LYS 157 0.1371 85.6234 83.5000
1225 CA SER 158 0.1116 84.4824 87.3800
1231 CA ILE 159 0.0805 83.0929 84.1200
1239 CA PRO 160 0.1132 84.5549 84.2500
1246 CA SER 161 0.0509 81.7644 80.3800
1252 CA HIS 162 0.0377 81.1739 84.8100
1262 CA TYR 163 0.0217 80.4604 92.5600
1274 CA ILE 164 0.0166 80.2290 94.9400
1282 CA PRO 165 0.0203 80.3970 96.6200
1289 CA PRO 166 0.0194 80.3551 96.6200
1296 CA LYS 167 0.0340 81.0115 94.4400
1305 CA SER 168 0.0352 81.0645 93.8100
1311 CA THR 169 0.0397 81.2656 89.9400
1318 CA TRP 170 0.0366 81.1278 86.3100
1332 CA ALA 171 0.0568 82.0292 83.7500
1337 CA PHE 172 0.0596 82.1569 78.9400
1348 CA ASP 173 0.1074 84.2938 73.0000
1356 CA LEU 174 0.0970 83.8315 66.5600
1364 CA PRO 175 0.0893 83.4833 63.9400
1371 CA ASN 176 0.0720 82.7112 71.0000
1379 CA VAL 177 0.0420 81.3683 83.4400
1386 CA SER 178 0.0421 81.3729 88.6200
1392 CA TRP 179 0.0306 80.8564 91.8100
1406 CA ARG 180 0.0331 80.9688 93.4400
1417 CA ILE 181 0.0234 80.5372 94.0600
1425 CA ILE 182 0.0306 80.8574 91.5000
1433 CA ASN 183 0.0320 80.9212 90.3800
1441 CA ASP 184 0.0320 80.9209 88.0600
1449 CA GLN 185 0.0695 82.5975 87.1200
1458 CA GLY 186 0.0509 81.7662 84.1200
1462 CA GLY 187 0.0658 82.4349 88.2500
1466 CA LEU 188 0.0582 82.0916 90.3100
1474 CA ASP 189 0.0498 81.7167 91.5000
1482 CA ARG 190 0.0681 82.5347 92.8100
1493 CA LEU 191 0.0573 82.0511 91.8800
1501 CA TYR 192 0.0392 81.2439 91.0000
1513 CA SER 193 0.0518 81.8062 87.7500
1519 CA LYS 194 0.0522 81.8255 82.8800
1528 CA ASN 195 0.1025 84.0745 78.5000
1536 CA VAL 196 0.0737 82.7862 75.5000

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.

Should you encounter any unexpected behaviour, please let us know.