Residue-by-residue B-factor prediction for CA atoms
B-factors are computed based on the first 100 normal modes (B-PREDICT)
and are scaled to match the overall B-factors in the submitted model (B-SCALED).
A high correlation with the observations is an indicator that the normal modes capture well the
overall flexibility features of the model.
Comparison of the observed (B-OBS, blue) and the
computed (B-SCALED, red) B-factors for
all C-alpha atoms is presented below.
Differences between B-factors from normal mode analysis
and from X-ray crystallographic data may for example indicate regions where
the protein flexibility is modified due to external factors such as
tight crystall-packing.
ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS
B-SCALED
B-OBS
13 CA PRO 1 0.0141
19 CA GLN 2 0.0084
36 CA ILE 3 0.0038
55 CA THR 4 0.0055
69 CA LEU 5 0.0028
88 CA TRP 6 0.0092
112 CA GLN 7 0.0096
129 CA ARG 8 0.0033
161 CA PRO 9 0.0024
167 CA LEU 10 0.0033
186 CA VAL 11 0.0031
202 CA THR 12 0.0053
216 CA ILE 13 0.0031
235 CA LYS 14 0.0050
257 CA ILE 15 0.0037
276 CA GLY 16 0.0078
283 CA GLY 17 0.0250
290 CA GLN 18 0.0096
307 CA LEU 19 0.0095
326 CA LYS 20 0.0051
348 CA GLU 21 0.0044
363 CA ALA 22 0.0022
373 CA LEU 23 0.0017
392 CA LEU 24 0.0016
411 CA ASH 25 0.0013
424 CA THR 26 0.0014
438 CA GLY 27 0.0015
445 CA ALA 28 0.0016
455 CA ASP 29 0.0021
467 CA ASP 30 0.0017
479 CA THR 31 0.0013
493 CA VAL 32 0.0013
509 CA LEU 33 0.0017
528 CA GLU 34 0.0034
543 CA GLU 35 0.0067
558 CA MET 36 0.0057
575 CA SER 37 0.0111
586 CA LEU 38 0.0063
613 CA PRO 39 0.0199
619 CA GLY 40 0.0388
626 CA ARG 41 0.0309
650 CA TRP 42 0.0092
674 CA LYS 43 0.0109
704 CA PRO 44 0.0099
710 CA LYS 45 0.0064
732 CA MET 46 0.0083
749 CA ILE 47 0.0042
768 CA GLY 48 0.0042
775 CA GLY 49 0.0030
782 CA ILE 50 0.0026
801 CA GLY 51 0.0050
808 CA GLY 52 0.0075
815 CA PHE 53 0.0091
835 CA ILE 54 0.0053
854 CA LYS 55 0.0072
876 CA VAL 56 0.0036
892 CA ARG 57 0.0043
916 CA GLN 58 0.0039
933 CA TYR 59 0.0041
954 CA ASP 60 0.0075
966 CA GLN 61 0.0116
983 CA ILE 62 0.0042
1002 CA LEU 63 0.0052
1021 CA ILE 64 0.0027
1040 CA GLU 65 0.0043
1055 CA ILE 66 0.0029
1074 CA CYS 67 0.0052
1085 CA GLY 68 0.0140
1092 CA HIS 69 0.0065
1109 CA LYS 70 0.0073
1131 CA ALA 71 0.0040
1141 CA ILE 72 0.0061
1160 CA GLY 73 0.0043
1167 CA THR 74 0.0033
1181 CA VAL 75 0.0019
1197 CA LEU 76 0.0018
1216 CA VAL 77 0.0024
1232 CA GLY 78 0.0033
1247 CA PRO 79 0.0053
1253 CA THR 80 0.0029
1275 CA PRO 81 0.0041
1281 CA VAL 82 0.0024
1297 CA ASN 83 0.0020
1311 CA ILE 84 0.0014
1330 CA ILE 85 0.0013
1349 CA GLY 86 0.0015
1356 CA ARG 87 0.0021
1380 CA ASN 88 0.0023
1394 CA LEU 89 0.0021
1413 CA LEU 90 0.0018
1432 CA THR 91 0.0033
1446 CA GLN 92 0.0048
1463 CA ILE 93 0.0038
1482 CA GLY 94 0.0043
1489 CA CYS 95 0.0026
1500 CA THR 96 0.0032
1514 CA LEU 97 0.0023
1533 CA ASN 98 0.0040
1547 CA PHE 99 0.0047
1578 CA PRO 101 0.0136
1584 CA GLN 102 0.0083
1601 CA ILE 103 0.0038
1620 CA THR 104 0.0050
1634 CA LEU 105 0.0028
1653 CA TRP 106 0.0083
1677 CA GLN 107 0.0085
1694 CA ARG 108 0.0035
1726 CA PRO 109 0.0024
1732 CA LEU 110 0.0034
1751 CA VAL 111 0.0032
1767 CA THR 112 0.0055
1781 CA ILE 113 0.0031
1800 CA LYS 114 0.0050
1822 CA ILE 115 0.0040
1841 CA GLY 116 0.0088
1848 CA GLY 117 0.0230
1855 CA GLN 118 0.0116
1872 CA LEU 119 0.0098
1891 CA LYS 120 0.0055
1913 CA GLU 121 0.0049
1928 CA ALA 122 0.0022
1938 CA LEU 123 0.0017
1957 CA LEU 124 0.0016
1976 CA ASP 125 0.0013
1988 CA THR 126 0.0014
2002 CA GLY 127 0.0015
2009 CA ALA 128 0.0015
2019 CA ASP 129 0.0020
2031 CA ASP 130 0.0017
2043 CA THR 131 0.0013
2057 CA VAL 132 0.0014
2073 CA LEU 133 0.0017
2092 CA GLU 134 0.0034
2107 CA GLU 135 0.0075
2122 CA MET 136 0.0061
2139 CA SER 137 0.0122
2150 CA LEU 138 0.0066
2177 CA PRO 139 0.0198
2183 CA GLY 140 0.0415
2190 CA ARG 141 0.0280
2214 CA TRP 142 0.0097
2238 CA LYS 143 0.0106
2268 CA PRO 144 0.0102
2274 CA LYS 145 0.0060
2296 CA MET 146 0.0078
2313 CA ILE 147 0.0041
2332 CA GLY 148 0.0045
2339 CA GLY 149 0.0031
2346 CA ILE 150 0.0027
2365 CA GLY 151 0.0049
2372 CA GLY 152 0.0079
2379 CA PHE 153 0.0091
2399 CA ILE 154 0.0055
2418 CA LYS 155 0.0074
2440 CA VAL 156 0.0036
2456 CA ARG 157 0.0042
2480 CA GLN 158 0.0039
2497 CA TYR 159 0.0042
2518 CA ASP 160 0.0074
2530 CA GLN 161 0.0112
2547 CA ILE 162 0.0044
2566 CA LEU 163 0.0057
2585 CA ILE 164 0.0028
2604 CA GLU 165 0.0041
2619 CA ILE 166 0.0027
2638 CA CYS 167 0.0046
2649 CA GLY 168 0.0103
2656 CA HIS 169 0.0062
2673 CA LYS 170 0.0071
2695 CA ALA 171 0.0040
2705 CA ILE 172 0.0062
2724 CA GLY 173 0.0044
2731 CA THR 174 0.0031
2745 CA VAL 175 0.0018
2761 CA LEU 176 0.0018
2780 CA VAL 177 0.0025
2796 CA GLY 178 0.0033
2811 CA PRO 179 0.0048
2817 CA THR 180 0.0028
2839 CA PRO 181 0.0035
2845 CA VAL 182 0.0025
2861 CA ASN 183 0.0020
2875 CA ILE 184 0.0014
2894 CA ILE 185 0.0013
2913 CA GLY 186 0.0015
2920 CA ARG 187 0.0020
2944 CA ASN 188 0.0023
2958 CA LEU 189 0.0020
2977 CA LEU 190 0.0018
2996 CA THR 191 0.0034
3010 CA GLN 192 0.0042
3027 CA ILE 193 0.0037
3046 CA GLY 194 0.0044
3053 CA CYS 195 0.0026
3064 CA THR 196 0.0032
3078 CA LEU 197 0.0023
3097 CA ASN 198 0.0038
3111 CA PHE 199 0.0047
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elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.