CNRS Nantes University US2B US2B
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Normal Mode Analysis for ID 2407140045133527185

conformational change will be analysed

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: Rotation-translation modes have a cumulative overlap of 0.5860 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.4942 0.075 -818.7382
mode 8 1.04 0.4648 0.173 -922.5487
mode 9 1.95 0.4334 0.173 -58.0194
mode 10 2.23 0.4909 0.531 1784.9807
mode 11 2.78 0.6054 0.536 -200.7137
mode 12 3.58 0.6868 0.703 1217.8512
mode 13 3.74 0.5633 0.706 -114.7163
mode 14 4.69 0.6072 0.713 257.4997
mode 15 4.98 0.5610 0.755 605.6112
mode 16 5.49 0.6300 0.757 -199.3626
mode 17 5.83 0.6131 0.811 677.7119
mode 18 6.42 0.5774 0.824 -353.0450
mode 19 7.57 0.5640 0.847 452.2027
mode 20 7.76 0.5701 0.852 222.3187
mode 21 7.98 0.3632 0.855 -142.8933
mode 22 8.61 0.5248 0.860 -189.2393
mode 23 8.75 0.3631 0.860 -61.0754
mode 24 9.20 0.3983 0.860 7.2331
mode 25 9.43 0.4280 0.860 88.3924
mode 26 9.80 0.3065 0.865 -216.5944
mode 27 10.12 0.0899 0.865 -44.3775
mode 28 10.35 0.5027 0.873 261.8046
mode 29 10.47 0.5131 0.876 112.5981
mode 30 10.82 0.4589 0.888 -333.0753
mode 31 11.02 0.4676 0.896 256.9354
mode 32 11.18 0.3410 0.896 132.0808
mode 33 11.56 0.2557 0.896 -31.8355
mode 34 11.88 0.2204 0.899 -123.6439
mode 35 12.03 0.4103 0.899 -18.0387
mode 36 12.24 0.1778 0.899 -25.5082
mode 37 12.31 0.3969 0.899 47.5375
mode 38 12.92 0.3663 0.899 52.9233
mode 39 13.09 0.2520 0.899 20.5235
mode 40 13.21 0.3879 0.901 63.5829
mode 41 13.34 0.4225 0.901 -67.9632
mode 42 13.64 0.2210 0.901 -21.7861
mode 43 13.97 0.2316 0.901 60.7809
mode 44 14.08 0.3288 0.901 -14.4758
mode 45 14.24 0.3573 0.904 144.2478
mode 46 14.51 0.3711 0.904 4.9748
mode 47 14.71 0.3926 0.904 -13.4718
mode 48 15.01 0.3910 0.904 -76.7307
mode 49 15.11 0.3659 0.906 -167.7936
mode 50 15.15 0.3480 0.906 -20.2270
mode 51 15.35 0.3632 0.922 354.7441
mode 52 15.40 0.4043 0.927 212.0595
mode 53 15.48 0.3621 0.930 -143.8404
mode 54 15.56 0.3486 0.930 26.4684
mode 55 15.78 0.2919 0.930 -34.6798
mode 56 15.87 0.4214 0.930 -110.2192
mode 57 15.98 0.4346 0.930 -12.3238
mode 58 16.02 0.4452 0.932 -150.3473
mode 59 16.09 0.4514 0.932 -43.6011
mode 60 16.16 0.3125 0.935 100.1742
mode 61 16.35 0.1879 0.935 -76.0660
mode 62 16.57 0.5745 0.935 32.8622
mode 63 16.65 0.4288 0.935 -39.9464
mode 64 16.92 0.4199 0.935 -4.3710
mode 65 17.14 0.4984 0.935 55.5828
mode 66 17.30 0.3183 0.935 -20.8976
mode 67 17.49 0.5476 0.937 -136.7022
mode 68 17.71 0.1241 0.937 -60.6801
mode 69 17.82 0.4516 0.937 10.8249
mode 70 17.89 0.3640 0.937 -13.6794
mode 71 18.13 0.3646 0.937 -3.3743
mode 72 18.19 0.2767 0.940 -106.9306
mode 73 18.33 0.1628 0.943 -162.3755
mode 74 18.39 0.3555 0.943 -2.1382
mode 75 18.62 0.3116 0.943 -8.0443
mode 76 18.70 0.4131 0.943 -23.1958
mode 77 18.82 0.3735 0.943 -6.4553
mode 78 18.99 0.4479 0.943 -39.0145
mode 79 19.10 0.4127 0.943 79.4499
mode 80 19.26 0.3460 0.945 33.1004
mode 81 19.29 0.2513 0.945 45.5092
mode 82 19.46 0.4043 0.945 -40.6336
mode 83 19.50 0.4222 0.945 -22.8188
mode 84 19.64 0.2951 0.945 68.3288
mode 85 19.78 0.3843 0.945 91.9821
mode 86 19.97 0.4332 0.945 54.2636
mode 87 20.17 0.1478 0.945 12.1083
mode 88 20.19 0.4997 0.945 -41.0179
mode 89 20.25 0.3958 0.948 48.4405
mode 90 20.33 0.4160 0.948 -44.1516
mode 91 20.53 0.3938 0.948 33.0288
mode 92 20.63 0.4379 0.948 10.5707
mode 93 20.75 0.4369 0.948 114.1551
mode 94 21.00 0.4481 0.950 149.3312
mode 95 21.05 0.2630 0.950 -25.3936
mode 96 21.08 0.3367 0.953 -77.0188
mode 97 21.25 0.5018 0.953 77.9300
mode 98 21.29 0.4762 0.953 94.0997
mode 99 21.46 0.3858 0.953 22.0938
mode 100 21.50 0.3758 0.953 -4.7987
mode 101 21.54 0.3928 0.955 -112.4549
mode 102 21.71 0.5180 0.958 140.0718
mode 103 21.79 0.5129 0.958 14.5255
mode 104 21.91 0.3037 0.958 67.1356
mode 105 22.03 0.3342 0.958 14.6658
mode 106 22.07 0.5166 0.958 57.0726

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.