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***  Mak_Prdx1_Model  ***

Normal Mode Analysis for ID 23011808392224348

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6664
mode 8 1.13 0.6184
mode 9 1.24 0.5885
mode 10 1.50 0.2121
mode 11 1.63 0.2258
mode 12 1.71 0.4721
mode 13 1.76 0.6397
mode 14 1.97 0.6209
mode 15 2.00 0.2967
mode 16 2.03 0.3928
mode 17 2.16 0.3306
mode 18 2.28 0.2047
mode 19 2.30 0.2534
mode 20 2.35 0.3269
mode 21 2.36 0.4617
mode 22 2.38 0.4419
mode 23 2.47 0.4299
mode 24 2.57 0.3316
mode 25 2.60 0.4892
mode 26 2.63 0.3492
mode 27 2.67 0.2259
mode 28 2.70 0.4877
mode 29 2.73 0.4359
mode 30 2.76 0.3003
mode 31 2.81 0.2991
mode 32 2.89 0.3014
mode 33 2.94 0.3632
mode 34 2.96 0.4951
mode 35 3.02 0.4461
mode 36 3.06 0.2866
mode 37 3.11 0.6184
mode 38 3.17 0.4668
mode 39 3.23 0.4732
mode 40 3.23 0.4749
mode 41 3.28 0.4610
mode 42 3.30 0.4631
mode 43 3.35 0.3951
mode 44 3.36 0.4439
mode 45 3.39 0.4591
mode 46 3.48 0.3803
mode 47 3.52 0.4615
mode 48 3.55 0.4821
mode 49 3.58 0.3687
mode 50 3.61 0.4364
mode 51 3.62 0.5429
mode 52 3.69 0.4283
mode 53 3.71 0.3465
mode 54 3.72 0.4238
mode 55 3.77 0.1099
mode 56 3.80 0.2366
mode 57 3.82 0.5804
mode 58 3.84 0.3222
mode 59 3.86 0.4186
mode 60 3.91 0.3620
mode 61 3.95 0.4569
mode 62 3.99 0.4237
mode 63 4.04 0.3676
mode 64 4.05 0.4355
mode 65 4.09 0.3582
mode 66 4.12 0.3197
mode 67 4.15 0.4518
mode 68 4.16 0.4329
mode 69 4.20 0.4027
mode 70 4.23 0.2509
mode 71 4.24 0.2391
mode 72 4.27 0.2024
mode 73 4.31 0.4325
mode 74 4.33 0.4642
mode 75 4.33 0.4337
mode 76 4.39 0.3537
mode 77 4.40 0.1534
mode 78 4.42 0.2876
mode 79 4.44 0.3225
mode 80 4.46 0.4935
mode 81 4.47 0.1846
mode 82 4.48 0.2841
mode 83 4.51 0.3841
mode 84 4.53 0.4559
mode 85 4.57 0.4218
mode 86 4.58 0.3120
mode 87 4.61 0.3214
mode 88 4.61 0.4901
mode 89 4.64 0.3877
mode 90 4.67 0.3004
mode 91 4.68 0.3711
mode 92 4.69 0.2541
mode 93 4.71 0.3928
mode 94 4.72 0.4033
mode 95 4.74 0.3562
mode 96 4.75 0.4668
mode 97 4.78 0.2862
mode 98 4.80 0.3432
mode 99 4.82 0.3788
mode 100 4.84 0.3549
mode 101 4.86 0.3802
mode 102 4.87 0.5315
mode 103 4.90 0.2374
mode 104 4.91 0.3833
mode 105 4.93 0.3089
mode 106 4.93 0.4323

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.