CNRS Nantes University UFIP UFIP
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.


***  8d9p  ***

Normal Mode Analysis for ID 22100401063033404

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7105
mode 8 1.02 0.7245
mode 9 1.18 0.6071
mode 10 2.08 0.7003
mode 11 2.17 0.6929
mode 12 2.25 0.6578
mode 13 2.38 0.7201
mode 14 2.87 0.1572
mode 15 2.96 0.2477
mode 16 3.04 0.4537
mode 17 3.14 0.5306
mode 18 3.23 0.4602
mode 19 3.37 0.3253
mode 20 3.47 0.3406
mode 21 3.65 0.5419
mode 22 3.74 0.3080
mode 23 3.86 0.4075
mode 24 3.95 0.2825
mode 25 4.03 0.3588
mode 26 4.21 0.3695
mode 27 4.27 0.3049
mode 28 4.40 0.1601
mode 29 4.47 0.4586
mode 30 4.49 0.4447
mode 31 4.58 0.4970
mode 32 4.68 0.6465
mode 33 4.79 0.4823
mode 34 4.82 0.3963
mode 35 4.91 0.1525
mode 36 4.98 0.3853
mode 37 5.15 0.3634
mode 38 5.19 0.4114
mode 39 5.24 0.2654
mode 40 5.33 0.5030
mode 41 5.43 0.4224
mode 42 5.44 0.1189
mode 43 5.47 0.1469
mode 44 5.54 0.4658
mode 45 5.63 0.3685
mode 46 5.67 0.4609
mode 47 5.70 0.3689
mode 48 5.70 0.6054
mode 49 5.77 0.3263
mode 50 5.83 0.3654
mode 51 5.83 0.3717
mode 52 5.89 0.4954
mode 53 5.94 0.4344
mode 54 6.03 0.4068
mode 55 6.06 0.4060
mode 56 6.12 0.3712
mode 57 6.15 0.3914
mode 58 6.22 0.3573
mode 59 6.24 0.4460
mode 60 6.28 0.4311
mode 61 6.32 0.2879
mode 62 6.35 0.3880
mode 63 6.40 0.3872
mode 64 6.42 0.3523
mode 65 6.47 0.4907
mode 66 6.48 0.3106
mode 67 6.54 0.2160
mode 68 6.59 0.4083
mode 69 6.61 0.1895
mode 70 6.65 0.2521
mode 71 6.69 0.2373
mode 72 6.72 0.3333
mode 73 6.75 0.4825
mode 74 6.79 0.1968
mode 75 6.83 0.3728
mode 76 6.88 0.3358
mode 77 6.93 0.2469
mode 78 6.95 0.3387
mode 79 7.00 0.5133
mode 80 7.03 0.3235
mode 81 7.05 0.5048
mode 82 7.12 0.1762
mode 83 7.16 0.2296
mode 84 7.24 0.3437
mode 85 7.27 0.3539
mode 86 7.28 0.4270
mode 87 7.33 0.3627
mode 88 7.37 0.4878
mode 89 7.40 0.3933
mode 90 7.42 0.3642
mode 91 7.47 0.4026
mode 92 7.53 0.5301
mode 93 7.59 0.4445
mode 94 7.64 0.4510
mode 95 7.67 0.3917
mode 96 7.71 0.4271
mode 97 7.77 0.4389
mode 98 7.77 0.0578
mode 99 7.81 0.4888
mode 100 7.83 0.3465
mode 101 7.86 0.3723
mode 102 7.92 0.3967
mode 103 7.97 0.4627
mode 104 8.01 0.3236
mode 105 8.01 0.3956
mode 106 8.04 0.4001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.