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Normal Mode Analysis for ID 22092323273356655

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0591
mode 8 1.24 0.1082
mode 9 1.80 0.0323
mode 10 3.23 0.0973
mode 11 3.71 0.3294
mode 12 4.05 0.1328
mode 13 4.16 0.1999
mode 14 4.87 0.0763
mode 15 5.25 0.0744
mode 16 5.86 0.2261
mode 17 5.98 0.2712
mode 18 6.39 0.1948
mode 19 6.95 0.3189
mode 20 7.40 0.1398
mode 21 7.42 0.2225
mode 22 7.78 0.1215
mode 23 8.29 0.3406
mode 24 8.88 0.1382
mode 25 9.19 0.2537
mode 26 9.55 0.3562
mode 27 10.02 0.1530
mode 28 10.31 0.3032
mode 29 10.65 0.1892
mode 30 11.13 0.1126
mode 31 11.48 0.1794
mode 32 11.68 0.5257
mode 33 11.94 0.4804
mode 34 12.20 0.3860
mode 35 12.59 0.2727
mode 36 13.04 0.1240
mode 37 13.49 0.5384
mode 38 13.89 0.3769
mode 39 13.97 0.0282
mode 40 14.16 0.1421
mode 41 14.26 0.0897
mode 42 14.58 0.2028
mode 43 15.12 0.1488
mode 44 15.22 0.4253
mode 45 15.35 0.1333
mode 46 15.66 0.1818
mode 47 15.79 0.3615
mode 48 15.99 0.0750
mode 49 16.32 0.4275
mode 50 16.77 0.3061
mode 51 17.16 0.2248
mode 52 17.25 0.3475
mode 53 17.72 0.2705
mode 54 17.95 0.3458
mode 55 18.12 0.2158
mode 56 18.20 0.3719
mode 57 18.86 0.1232
mode 58 18.92 0.2518
mode 59 19.13 0.3890
mode 60 19.18 0.2695
mode 61 19.48 0.2648
mode 62 19.65 0.3657
mode 63 19.80 0.3669
mode 64 20.05 0.2673
mode 65 20.17 0.2106
mode 66 20.85 0.3653
mode 67 20.90 0.4558
mode 68 21.10 0.3495
mode 69 21.33 0.4668
mode 70 21.36 0.2491
mode 71 21.59 0.1735
mode 72 21.96 0.2807
mode 73 21.99 0.4248
mode 74 22.30 0.2873
mode 75 22.49 0.3982
mode 76 22.70 0.3376
mode 77 22.91 0.3349
mode 78 22.99 0.3725
mode 79 23.18 0.4251
mode 80 23.38 0.3745
mode 81 23.73 0.4536
mode 82 23.83 0.0519
mode 83 24.18 0.4767
mode 84 24.37 0.4126
mode 85 24.44 0.4448
mode 86 24.60 0.4600
mode 87 24.73 0.4686
mode 88 24.95 0.3906
mode 89 25.09 0.1736
mode 90 25.30 0.2619
mode 91 25.32 0.2691
mode 92 25.41 0.2740
mode 93 25.55 0.2703
mode 94 25.82 0.2267
mode 95 26.08 0.3682
mode 96 26.18 0.3706
mode 97 26.30 0.1623
mode 98 26.43 0.5205
mode 99 26.67 0.5381
mode 100 26.80 0.4118
mode 101 27.01 0.1065
mode 102 27.09 0.3138
mode 103 27.25 0.3108
mode 104 27.42 0.3500
mode 105 27.57 0.2690
mode 106 27.80 0.3047

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.