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Normal Mode Analysis for ID 22052612130314259

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7109
mode 8 1.61 0.4810
mode 9 2.15 0.5840
mode 10 2.95 0.0390
mode 11 4.54 0.3772
mode 12 4.98 0.3390
mode 13 5.52 0.6167
mode 14 6.37 0.4202
mode 15 7.17 0.1316
mode 16 8.21 0.0222
mode 17 9.04 0.5254
mode 18 10.25 0.2819
mode 19 10.58 0.3387
mode 20 12.21 0.4337
mode 21 12.36 0.4491
mode 22 12.40 0.3334
mode 23 13.44 0.4382
mode 24 13.78 0.2747
mode 25 15.35 0.2584
mode 26 15.65 0.1724
mode 27 15.78 0.1456
mode 28 16.11 0.4340
mode 29 16.25 0.1742
mode 30 16.74 0.2281
mode 31 16.98 0.2979
mode 32 18.24 0.2374
mode 33 18.32 0.2787
mode 34 18.48 0.1333
mode 35 19.13 0.5284
mode 36 19.74 0.4559
mode 37 20.01 0.1665
mode 38 20.24 0.2968
mode 39 21.03 0.2447
mode 40 21.52 0.1642
mode 41 21.67 0.0936
mode 42 22.55 0.3373
mode 43 22.77 0.2360
mode 44 23.64 0.4872
mode 45 23.97 0.5358
mode 46 24.07 0.4625
mode 47 24.65 0.3998
mode 48 24.80 0.3594
mode 49 25.10 0.3404
mode 50 25.30 0.3812
mode 51 25.73 0.1686
mode 52 26.01 0.3692
mode 53 27.15 0.2331
mode 54 27.20 0.2393
mode 55 27.40 0.2626
mode 56 27.57 0.3574
mode 57 27.66 0.3309
mode 58 28.33 0.4558
mode 59 28.49 0.3804
mode 60 28.62 0.3992
mode 61 28.79 0.2270
mode 62 28.88 0.4252
mode 63 29.23 0.4052
mode 64 30.05 0.5001
mode 65 30.20 0.4372
mode 66 30.28 0.3583
mode 67 30.42 0.2891
mode 68 30.64 0.2577
mode 69 30.87 0.4737
mode 70 31.12 0.3614
mode 71 31.33 0.2057
mode 72 31.50 0.2820
mode 73 31.75 0.3076
mode 74 31.89 0.2647
mode 75 31.98 0.1967
mode 76 32.23 0.2156
mode 77 32.28 0.3671
mode 78 32.63 0.0867
mode 79 32.90 0.4583
mode 80 32.94 0.4028
mode 81 33.22 0.3698
mode 82 33.80 0.1936
mode 83 34.02 0.3962
mode 84 34.23 0.3652
mode 85 34.40 0.3979
mode 86 34.72 0.3138
mode 87 34.86 0.2528
mode 88 34.95 0.3818
mode 89 35.36 0.3589
mode 90 35.58 0.2503
mode 91 35.65 0.2817
mode 92 35.90 0.4095
mode 93 35.92 0.3089
mode 94 36.10 0.4173
mode 95 36.42 0.3282
mode 96 36.69 0.3039
mode 97 36.86 0.3656
mode 98 37.00 0.2838
mode 99 37.15 0.2954
mode 100 37.39 0.4063
mode 101 37.67 0.4076
mode 102 37.79 0.1355
mode 103 37.94 0.3455
mode 104 38.25 0.4637
mode 105 38.38 0.3787
mode 106 38.54 0.3583

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.