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Normal Mode Analysis for ID 22050512565066086

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.1835
mode 8 1.37 0.2303
mode 9 1.68 0.1249
mode 10 2.13 0.0754
mode 11 2.65 0.0660
mode 12 2.89 0.4185
mode 13 3.11 0.4980
mode 14 3.45 0.1888
mode 15 3.51 0.1780
mode 16 3.69 0.2806
mode 17 3.85 0.2277
mode 18 4.29 0.4954
mode 19 4.39 0.4227
mode 20 4.61 0.4256
mode 21 4.77 0.1807
mode 22 4.86 0.1310
mode 23 5.23 0.1667
mode 24 5.70 0.3866
mode 25 5.78 0.4537
mode 26 6.02 0.4198
mode 27 6.14 0.4556
mode 28 6.33 0.2764
mode 29 6.49 0.1553
mode 30 6.72 0.4850
mode 31 6.89 0.6216
mode 32 6.96 0.1180
mode 33 7.11 0.3648
mode 34 7.22 0.1796
mode 35 7.32 0.4039
mode 36 7.49 0.4583
mode 37 7.57 0.3018
mode 38 7.77 0.3537
mode 39 7.88 0.4820
mode 40 8.00 0.6139
mode 41 8.17 0.4666
mode 42 8.42 0.4462
mode 43 8.49 0.4344
mode 44 8.64 0.5917
mode 45 8.89 0.6423
mode 46 9.00 0.5179
mode 47 9.11 0.5508
mode 48 9.20 0.6382
mode 49 9.46 0.4016
mode 50 9.54 0.5185
mode 51 9.62 0.3835
mode 52 9.64 0.5499
mode 53 9.73 0.4236
mode 54 9.92 0.3455
mode 55 10.12 0.4295
mode 56 10.20 0.3479
mode 57 10.36 0.2471
mode 58 10.51 0.4143
mode 59 10.58 0.1850
mode 60 10.61 0.2051
mode 61 10.82 0.5417
mode 62 10.91 0.2054
mode 63 11.07 0.4528
mode 64 11.17 0.4656
mode 65 11.27 0.3801
mode 66 11.29 0.4633
mode 67 11.41 0.2041
mode 68 11.55 0.4177
mode 69 11.60 0.4964
mode 70 11.76 0.5325
mode 71 11.97 0.5879
mode 72 12.00 0.3792
mode 73 12.07 0.4917
mode 74 12.20 0.4346
mode 75 12.36 0.6036
mode 76 12.45 0.3668
mode 77 12.57 0.5541
mode 78 12.66 0.5774
mode 79 12.70 0.4799
mode 80 12.80 0.5618
mode 81 12.84 0.5526
mode 82 13.01 0.5170
mode 83 13.07 0.5026
mode 84 13.13 0.4565
mode 85 13.22 0.3295
mode 86 13.36 0.3885
mode 87 13.41 0.5322
mode 88 13.54 0.4160
mode 89 13.64 0.5220
mode 90 13.68 0.5094
mode 91 13.73 0.5191
mode 92 13.78 0.4443
mode 93 13.83 0.4176
mode 94 13.95 0.3958
mode 95 14.03 0.4345
mode 96 14.09 0.5662
mode 97 14.16 0.4715
mode 98 14.22 0.4681
mode 99 14.29 0.4224
mode 100 14.32 0.4579
mode 101 14.50 0.5220
mode 102 14.63 0.5693
mode 103 14.70 0.4744
mode 104 14.75 0.5435
mode 105 14.86 0.4509
mode 106 14.96 0.5413

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.