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Normal Mode Analysis for ID 22040305420431560

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.2331
mode 8 1.24 0.4135
mode 9 1.88 0.0097
mode 10 2.46 0.0098
mode 11 2.99 0.6099
mode 12 3.54 0.0164
mode 13 4.11 0.5287
mode 14 6.11 0.0180
mode 15 6.85 0.2776
mode 16 7.75 0.0178
mode 17 8.73 0.3908
mode 18 8.88 0.6171
mode 19 9.70 0.1328
mode 20 10.26 0.1038
mode 21 10.88 0.4731
mode 22 12.17 0.0382
mode 23 14.73 0.6388
mode 24 15.03 0.4699
mode 25 15.71 0.0630
mode 26 17.02 0.0949
mode 27 17.12 0.1697
mode 28 19.36 0.1968
mode 29 19.75 0.0750
mode 30 20.67 0.4698
mode 31 21.01 0.1448
mode 32 23.69 0.0519
mode 33 25.98 0.2704
mode 34 26.24 0.0695
mode 35 28.43 0.1774
mode 36 29.84 0.4851
mode 37 30.55 0.6209
mode 38 31.61 0.3691
mode 39 32.57 0.0126
mode 40 33.76 0.3710
mode 41 34.14 0.0137
mode 42 37.36 0.2377
mode 43 39.12 0.0613
mode 44 39.34 0.1230
mode 45 41.57 0.1756
mode 46 42.15 0.3162
mode 47 43.07 0.2541
mode 48 45.76 0.5354
mode 49 45.93 0.2693
mode 50 47.28 0.4210
mode 51 48.32 0.4143
mode 52 49.00 0.0938
mode 53 50.69 0.2744
mode 54 51.36 0.4631
mode 55 52.32 0.1980
mode 56 55.14 0.4348
mode 57 56.29 0.0367
mode 58 57.76 0.5430
mode 59 58.25 0.1039
mode 60 58.69 0.1974
mode 61 60.05 0.0382
mode 62 61.06 0.5726
mode 63 61.41 0.3487
mode 64 62.28 0.0320
mode 65 63.03 0.4981
mode 66 64.74 0.0657
mode 67 65.29 0.3264
mode 68 66.15 0.2381
mode 69 67.81 0.3438
mode 70 68.35 0.2324
mode 71 68.97 0.1745
mode 72 71.34 0.3093
mode 73 71.78 0.2286
mode 74 72.05 0.2170
mode 75 73.32 0.2360
mode 76 74.57 0.0620
mode 77 75.07 0.3720
mode 78 76.27 0.1152
mode 79 76.95 0.4452
mode 80 77.19 0.2241
mode 81 79.01 0.1230
mode 82 80.12 0.2486
mode 83 80.51 0.2445
mode 84 81.16 0.1113
mode 85 82.32 0.2779
mode 86 83.13 0.1280
mode 87 83.71 0.3180
mode 88 84.77 0.3118
mode 89 84.91 0.2790
mode 90 85.52 0.4252
mode 91 86.91 0.1747
mode 92 87.33 0.3045
mode 93 87.92 0.1838
mode 94 88.37 0.0280
mode 95 89.09 0.2465
mode 96 90.02 0.1148
mode 97 90.34 0.0233
mode 98 91.73 0.0984
mode 99 92.13 0.1365
mode 100 92.96 0.4214
mode 101 93.61 0.4856
mode 102 94.41 0.4213
mode 103 95.18 0.4889
mode 104 96.60 0.4403
mode 105 97.52 0.3242
mode 106 98.22 0.5229

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.