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***  4rcf  ***

Normal Mode Analysis for ID 22021519044543130

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5623
mode 8 1.17 0.5640
mode 9 1.26 0.0790
mode 10 1.36 0.0962
mode 11 1.73 0.4539
mode 12 1.81 0.4339
mode 13 2.06 0.4687
mode 14 2.20 0.6116
mode 15 2.24 0.5008
mode 16 2.38 0.4817
mode 17 2.52 0.2787
mode 18 2.55 0.0575
mode 19 2.58 0.1792
mode 20 2.69 0.4333
mode 21 2.77 0.2886
mode 22 2.79 0.3708
mode 23 2.96 0.2543
mode 24 3.00 0.3431
mode 25 3.00 0.4201
mode 26 3.10 0.3084
mode 27 3.13 0.4320
mode 28 3.15 0.2159
mode 29 3.30 0.4488
mode 30 3.33 0.3339
mode 31 3.34 0.3067
mode 32 3.39 0.2480
mode 33 3.44 0.2973
mode 34 3.47 0.3367
mode 35 3.53 0.4696
mode 36 3.55 0.3576
mode 37 3.58 0.1415
mode 38 3.63 0.4270
mode 39 3.68 0.3763
mode 40 3.75 0.2937
mode 41 3.81 0.2860
mode 42 3.84 0.4229
mode 43 3.87 0.3819
mode 44 3.92 0.3872
mode 45 3.95 0.3095
mode 46 3.97 0.3443
mode 47 4.02 0.4177
mode 48 4.04 0.3949
mode 49 4.09 0.1786
mode 50 4.10 0.3550
mode 51 4.12 0.3501
mode 52 4.18 0.4024
mode 53 4.21 0.4701
mode 54 4.25 0.3442
mode 55 4.27 0.4145
mode 56 4.30 0.3415
mode 57 4.34 0.3451
mode 58 4.39 0.3847
mode 59 4.43 0.3460
mode 60 4.45 0.4757
mode 61 4.48 0.4713
mode 62 4.51 0.3755
mode 63 4.55 0.3259
mode 64 4.57 0.3786
mode 65 4.60 0.4405
mode 66 4.61 0.4436
mode 67 4.66 0.4802
mode 68 4.69 0.3526
mode 69 4.71 0.5268
mode 70 4.74 0.4334
mode 71 4.81 0.3084
mode 72 4.84 0.3543
mode 73 4.88 0.4580
mode 74 4.89 0.4991
mode 75 4.93 0.3840
mode 76 4.95 0.2876
mode 77 4.98 0.4096
mode 78 5.00 0.3952
mode 79 5.01 0.4019
mode 80 5.08 0.3921
mode 81 5.11 0.4678
mode 82 5.18 0.3737
mode 83 5.19 0.4425
mode 84 5.20 0.3820
mode 85 5.22 0.4248
mode 86 5.25 0.4793
mode 87 5.29 0.3766
mode 88 5.34 0.3781
mode 89 5.39 0.3108
mode 90 5.41 0.3883
mode 91 5.41 0.4247
mode 92 5.47 0.3214
mode 93 5.48 0.3921
mode 94 5.50 0.3804
mode 95 5.52 0.3708
mode 96 5.56 0.4395
mode 97 5.60 0.3592
mode 98 5.61 0.3165
mode 99 5.65 0.4233
mode 100 5.67 0.3620
mode 101 5.69 0.3485
mode 102 5.72 0.3266
mode 103 5.74 0.4135
mode 104 5.77 0.4641
mode 105 5.79 0.3341
mode 106 5.81 0.3384

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.