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***  METAL BINDING PROTEIN 30-OCT-99 1D9V  ***

Normal Mode Analysis for ID 22020211090880531

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6911
mode 8 1.10 0.6680
mode 9 1.38 0.7028
mode 10 1.92 0.4914
mode 11 2.15 0.6014
mode 12 2.23 0.7211
mode 13 2.50 0.3563
mode 14 2.62 0.6044
mode 15 2.68 0.1917
mode 16 2.93 0.3526
mode 17 3.08 0.1829
mode 18 3.15 0.1301
mode 19 3.24 0.6231
mode 20 3.26 0.2340
mode 21 3.31 0.3520
mode 22 3.37 0.3556
mode 23 3.53 0.3174
mode 24 3.59 0.3782
mode 25 3.66 0.4933
mode 26 3.77 0.2544
mode 27 3.88 0.4059
mode 28 3.90 0.3533
mode 29 3.96 0.2867
mode 30 3.99 0.3828
mode 31 4.02 0.5203
mode 32 4.08 0.4429
mode 33 4.10 0.3180
mode 34 4.20 0.5953
mode 35 4.20 0.3685
mode 36 4.30 0.3267
mode 37 4.38 0.3631
mode 38 4.38 0.4849
mode 39 4.48 0.1856
mode 40 4.51 0.4207
mode 41 4.56 0.4959
mode 42 4.59 0.4241
mode 43 4.62 0.1826
mode 44 4.67 0.5840
mode 45 4.74 0.3094
mode 46 4.75 0.4358
mode 47 4.88 0.6491
mode 48 4.88 0.6062
mode 49 4.91 0.2704
mode 50 4.98 0.4590
mode 51 5.02 0.3717
mode 52 5.10 0.5271
mode 53 5.14 0.3516
mode 54 5.14 0.2963
mode 55 5.20 0.4161
mode 56 5.21 0.3540
mode 57 5.26 0.3223
mode 58 5.30 0.2586
mode 59 5.33 0.4206
mode 60 5.38 0.4805
mode 61 5.45 0.5617
mode 62 5.46 0.3980
mode 63 5.50 0.3349
mode 64 5.52 0.5069
mode 65 5.55 0.1953
mode 66 5.59 0.5400
mode 67 5.65 0.5065
mode 68 5.70 0.4220
mode 69 5.74 0.4369
mode 70 5.75 0.3400
mode 71 5.80 0.3460
mode 72 5.81 0.3650
mode 73 5.86 0.3572
mode 74 5.87 0.4068
mode 75 5.93 0.4869
mode 76 5.95 0.4692
mode 77 5.98 0.4511
mode 78 6.01 0.4935
mode 79 6.07 0.5316
mode 80 6.09 0.4314
mode 81 6.10 0.4700
mode 82 6.14 0.4389
mode 83 6.16 0.4762
mode 84 6.18 0.4936
mode 85 6.23 0.4878
mode 86 6.27 0.3781
mode 87 6.28 0.4392
mode 88 6.35 0.4699
mode 89 6.39 0.5248
mode 90 6.44 0.5309
mode 91 6.46 0.5651
mode 92 6.52 0.4962
mode 93 6.54 0.2689
mode 94 6.54 0.4389
mode 95 6.61 0.4757
mode 96 6.62 0.4568
mode 97 6.63 0.4755
mode 98 6.66 0.4039
mode 99 6.74 0.5541
mode 100 6.75 0.4379
mode 101 6.77 0.5003
mode 102 6.81 0.5043
mode 103 6.83 0.5743
mode 104 6.86 0.3277
mode 105 6.88 0.4252
mode 106 6.89 0.4327

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.