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***  VIRAL PROTEIN 08-OCT-20 7KDK  ***

Normal Mode Analysis for ID 21011820145742901

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7074
mode 8 1.82 0.5821
mode 9 2.22 0.7822
mode 10 3.41 0.7063
mode 11 4.31 0.5419
mode 12 4.63 0.6119
mode 13 6.74 0.7476
mode 14 8.49 0.6919
mode 15 11.19 0.4823
mode 16 12.22 0.4222
mode 17 12.63 0.6003
mode 18 14.74 0.5411
mode 19 17.32 0.1706
mode 20 19.21 0.4606
mode 21 20.74 0.3263
mode 22 23.25 0.2556
mode 23 24.04 0.6083
mode 24 25.09 0.2991
mode 25 27.64 0.2560
mode 26 30.97 0.2560
mode 27 32.04 0.3614
mode 28 32.72 0.1677
mode 29 34.53 0.1737
mode 30 38.31 0.4092
mode 31 39.95 0.0541
mode 32 41.71 0.2046
mode 33 43.48 0.2993
mode 34 47.45 0.3624
mode 35 48.23 0.1188
mode 36 49.16 0.2991
mode 37 52.47 0.3241
mode 38 56.13 0.2802
mode 39 57.66 0.3355
mode 40 58.46 0.3731
mode 41 59.38 0.2304
mode 42 62.41 0.2628
mode 43 63.70 0.1760
mode 44 66.21 0.3337
mode 45 68.50 0.0773
mode 46 68.65 0.1966
mode 47 70.55 0.0432
mode 48 72.73 0.1797
mode 49 74.17 0.2932
mode 50 74.46 0.3777
mode 51 75.63 0.3418
mode 52 76.32 0.2081
mode 53 77.47 0.2119
mode 54 78.46 0.2392
mode 55 82.36 0.2222
mode 56 84.41 0.2997
mode 57 84.77 0.1265
mode 58 87.08 0.2615
mode 59 88.24 0.1395
mode 60 88.27 0.0845
mode 61 90.22 0.1622
mode 62 90.89 0.2443
mode 63 92.54 0.3015
mode 64 94.69 0.2332
mode 65 95.24 0.2449
mode 66 96.99 0.1666
mode 67 98.43 0.1693
mode 68 99.04 0.2897
mode 69 100.56 0.3126
mode 70 102.67 0.3413
mode 71 102.97 0.3227
mode 72 104.24 0.1570
mode 73 107.01 0.3049
mode 74 107.37 0.2487
mode 75 107.73 0.3680
mode 76 108.16 0.3288
mode 77 110.06 0.3357
mode 78 110.46 0.3623
mode 79 111.28 0.2466
mode 80 112.65 0.1882
mode 81 113.94 0.3412
mode 82 114.26 0.2423
mode 83 115.46 0.3298
mode 84 115.79 0.3605
mode 85 116.26 0.4220
mode 86 117.16 0.1768
mode 87 118.47 0.3593
mode 88 118.96 0.1909
mode 89 119.63 0.2421
mode 90 120.18 0.4135
mode 91 121.57 0.3929
mode 92 122.43 0.1139
mode 93 122.50 0.0769
mode 94 125.19 0.3471
mode 95 125.72 0.4010
mode 96 126.44 0.2353
mode 97 126.68 0.2745
mode 98 127.07 0.3431
mode 99 128.77 0.2977
mode 100 129.94 0.3709
mode 101 130.68 0.1991
mode 102 130.93 0.2521
mode 103 131.12 0.3064
mode 104 131.83 0.2875
mode 105 132.38 0.1790
mode 106 132.96 0.3044

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: October 18th, 2018.