This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
LYS 1
VAL 2
0.0511
VAL 2
PHE 3
-0.1152
PHE 3
GLU 4
-0.1287
GLU 4
ARG 5
-0.0261
ARG 5
CYS 6
0.0612
CYS 6
GLU 7
-0.1782
GLU 7
LEU 8
-0.0008
LEU 8
ALA 9
-0.0598
ALA 9
ARG 10
-0.0218
ARG 10
THR 11
-0.0994
THR 11
LEU 12
-0.0148
LEU 12
LYS 13
-0.0057
LYS 13
ARG 14
-0.1409
ARG 14
LEU 15
0.0515
LEU 15
GLY 16
-0.1222
GLY 16
MET 17
-0.0740
MET 17
ASP 18
0.0509
ASP 18
GLY 19
0.1669
GLY 19
TYR 20
-0.0380
TYR 20
ARG 21
0.2811
ARG 21
GLY 22
0.0413
GLY 22
ILE 23
-0.1016
ILE 23
SER 24
0.3737
SER 24
LEU 25
0.0035
LEU 25
ALA 26
-0.1993
ALA 26
ASN 27
0.0964
ASN 27
TRP 28
-0.0246
TRP 28
MET 29
0.0250
MET 29
CYS 30
-0.0834
CYS 30
LEU 31
0.0969
LEU 31
ALA 32
0.0149
ALA 32
LYS 33
-0.0332
LYS 33
TRP 34
0.0553
TRP 34
GLU 35
0.5961
GLU 35
SER 36
0.1160
SER 36
GLY 37
-0.0914
GLY 37
TYR 38
0.0384
TYR 38
ASN 39
0.0566
ASN 39
THR 40
0.1956
THR 40
ARG 41
-0.1090
ARG 41
ALA 42
0.1028
ALA 42
THR 43
-0.0047
THR 43
ASN 44
-0.0470
ASN 44
TYR 45
0.1522
TYR 45
ASN 46
0.0815
ASN 46
ALA 47
-0.1447
ALA 47
GLY 48
0.0612
GLY 48
ASP 49
0.1057
ASP 49
ARG 50
0.0262
ARG 50
SER 51
0.0689
SER 51
THR 52
0.0645
THR 52
ASP 53
0.0084
ASP 53
TYR 54
-0.1032
TYR 54
GLY 55
0.0278
GLY 55
ILE 56
0.0002
ILE 56
PHE 57
-0.0444
PHE 57
GLN 58
-0.1166
GLN 58
THR 59
0.1157
THR 59
ASN 60
-0.3522
ASN 60
SER 61
0.0722
SER 61
ARG 62
-0.0304
ARG 62
TYR 63
-0.2224
TYR 63
TRP 64
-0.1655
TRP 64
CYS 65
-0.0286
CYS 65
ASN 66
0.0171
ASN 66
ASP 67
-0.0259
ASP 67
GLY 68
0.0586
GLY 68
LYS 69
0.2373
LYS 69
THR 70
-0.1922
THR 70
PRO 71
0.1010
PRO 71
GLY 72
-0.0930
GLY 72
ALA 73
0.1122
ALA 73
VAL 74
-0.0886
VAL 74
ASN 75
-0.0236
ASN 75
ALA 76
-0.0290
ALA 76
CYS 77
-0.0911
CYS 77
HIS 78
0.1266
HIS 78
LEU 79
-0.1258
LEU 79
SER 80
0.0805
SER 80
CYS 81
-0.0635
CYS 81
SER 82
0.0474
SER 82
ALA 83
0.0933
ALA 83
LEU 84
0.1056
LEU 84
LEU 85
-0.2608
LEU 85
GLN 86
0.0076
GLN 86
ASP 87
-0.0622
ASP 87
ASN 88
0.0218
ASN 88
ILE 89
0.0204
ILE 89
ALA 90
0.0489
ALA 90
ASP 91
0.0142
ASP 91
ALA 92
0.1267
ALA 92
VAL 93
-0.0317
VAL 93
ALA 94
0.0218
ALA 94
CYS 95
-0.0782
CYS 95
ALA 96
0.1475
ALA 96
LYS 97
0.0149
LYS 97
ARG 98
0.0035
ARG 98
VAL 99
0.1257
VAL 99
VAL 100
-0.0695
VAL 100
ARG 101
0.0257
ARG 101
ASP 102
0.0473
ASP 102
PRO 103
-0.2110
PRO 103
GLN 104
-0.0364
GLN 104
GLY 105
0.0407
GLY 105
ILE 106
0.0929
ILE 106
ARG 107
-0.0186
ARG 107
ALA 108
0.2116
ALA 108
TRP 109
-0.0980
TRP 109
VAL 110
0.3271
VAL 110
ALA 111
-0.2550
ALA 111
TRP 112
-0.0137
TRP 112
ARG 113
0.0063
ARG 113
ASN 114
-0.0669
ASN 114
ARG 115
-0.0432
ARG 115
CYS 116
-0.2204
CYS 116
GLN 117
0.1922
GLN 117
ASN 118
0.0038
ASN 118
ARG 119
0.0559
ARG 119
ASP 120
-0.0375
ASP 120
VAL 121
-0.0419
VAL 121
ARG 122
-0.0308
ARG 122
GLN 123
-0.0021
GLN 123
TYR 124
0.0485
TYR 124
VAL 125
-0.1272
VAL 125
GLN 126
0.1554
GLN 126
GLY 127
-0.1228
GLY 127
CYS 128
-0.0873
CYS 128
GLY 129
0.0543
GLY 129
VAL 130
0.0609
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.