Should you encounter any unexpected behaviour,
please let us know.

* 1JSF_F57T *

B-factor analysis for ID 2503181353133314038

Overall B-factor prediction

Correlation= 0.625 for 130 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

ATOM TYP RES RESID B-PREDICT B-SCALED B-OBS	B-SCALED	B-OBS
2 CA LYS 1 0.0061 15.2939 18.2500
26 CA VAL 2 0.0063 15.3807 14.6600
42 CA PHE 3 0.0031 13.5080 12.2900
62 CA GLU 4 0.0068 15.7098 16.5500
77 CA ARG 5 0.0036 13.8043 13.7000
101 CA CYS 6 0.0039 13.9535 12.4200
111 CA GLU 7 0.0040 14.0441 12.0700
126 CA LEU 8 0.0018 12.7301 10.9000
145 CA ALA 9 0.0020 12.8314 11.3600
155 CA ARG 10 0.0038 13.9043 12.2600
179 CA THR 11 0.0026 13.1975 11.6000
193 CA LEU 12 0.0018 12.7020 11.1800
212 CA LYS 13 0.0039 13.9450 11.9700
234 CA ARG 14 0.0093 17.1897 12.9600
258 CA LEU 15 0.0041 14.0952 11.7100
277 CA GLY 16 0.0048 14.5005 13.4800
284 CA MET 17 0.0022 12.9789 11.6000
301 CA ASP 18 0.0038 13.9009 14.4100
313 CA GLY 19 0.0080 16.4220 15.0500
320 CA TYR 20 0.0039 13.9432 11.9500
341 CA ARG 21 0.0071 15.8742 14.2800
365 CA GLY 22 0.0255 26.8642 12.7600
372 CA ILE 23 0.0032 13.5558 11.7700
391 CA SER 24 0.0037 13.8798 11.9700
402 CA LEU 25 0.0022 12.9297 12.2300
421 CA ALA 26 0.0024 13.0822 12.1600
431 CA ASN 27 0.0019 12.7677 11.7200
445 CA TRP 28 0.0013 12.4386 10.7700
469 CA MET 29 0.0015 12.5240 10.6100
486 CA CYS 30 0.0018 12.7405 11.4700
496 CA LEU 31 0.0016 12.5809 12.2700
515 CA ALA 32 0.0017 12.6650 11.1200
525 CA LYS 33 0.0028 13.3211 12.8800
547 CA TRP 34 0.0048 14.5369 13.4600
571 CA GLU 35 0.0026 13.1917 13.1100
586 CA SER 36 0.0031 13.4958 13.2500
597 CA GLY 37 0.0042 14.1501 14.6200
604 CA TYR 38 0.0026 13.2125 12.4100
625 CA ASN 39 0.0035 13.7395 13.0000
639 CA THR 40 0.0029 13.3953 12.6800
653 CA ARG 41 0.0053 14.7973 16.4600
677 CA ALA 42 0.0040 14.0291 15.2400
687 CA THR 43 0.0059 15.1772 16.6300
701 CA ASN 44 0.0108 18.0928 17.3600
715 CA TYR 45 0.0129 19.3573 19.2600
736 CA ASN 46 0.0155 20.9024 18.0700
750 CA ALA 47 0.0331 31.4471 23.8000
760 CA GLY 48 0.0622 48.8310 22.0700
767 CA ASP 49 0.0213 24.3736 20.3500
779 CA ARG 50 0.0136 19.7500 19.6800
803 CA SER 51 0.0059 15.1912 15.6200
814 CA THR 52 0.0040 14.0112 11.9400
828 CA ASP 53 0.0033 13.5943 12.5900
840 CA TYR 54 0.0025 13.1305 11.1000
861 CA GLY 55 0.0023 13.0162 11.2200
868 CA ILE 56 0.0019 12.7703 11.0600
887 CA THR 57 0.0016 12.6099 11.5800
901 CA GLN 58 0.0024 13.0948 11.5900
918 CA ILE 59 0.0018 12.7230 12.6900
937 CA ASN 60 0.0029 13.3471 12.2300
951 CA SER 61 0.0025 13.1556 12.0900
962 CA ARG 62 0.0053 14.8238 16.6100
986 CA TYR 63 0.0052 14.7490 17.9700
1007 CA TRP 64 0.0025 13.1309 13.1500
1031 CA CYS 65 0.0024 13.0524 12.6000
1041 CA ASN 66 0.0046 14.3760 12.0700
1055 CA ASP 67 0.0065 15.5024 13.4200
1067 CA GLY 68 0.0269 27.7250 14.7100
1074 CA LYS 69 0.0152 20.7279 17.6000
1096 CA THR 70 0.0076 16.1519 18.0100
1110 CA PRO 71 0.0201 23.6370 23.9600
1124 CA GLY 72 0.0355 32.8836 31.9800
1131 CA ALA 73 0.0084 16.6523 26.1000
1141 CA VAL 74 0.0116 18.5436 27.9900
1157 CA ASN 75 0.0056 15.0071 17.5800
1171 CA ALA 76 0.0058 15.1015 15.8400
1181 CA CYS 77 0.0038 13.9022 15.1500
1191 CA HIS 78 0.0129 19.3590 16.7100
1208 CA LEU 79 0.0047 14.4597 16.1400
1227 CA SER 80 0.0066 15.5763 13.2300
1238 CA CYS 81 0.0029 13.3970 11.8200
1248 CA SER 82 0.0067 15.6525 13.5400
1259 CA ALA 83 0.0046 14.3825 12.5600
1269 CA LEU 84 0.0023 12.9849 12.7100
1288 CA LEU 85 0.0038 13.9285 13.5400
1307 CA GLN 86 0.0055 14.9346 14.0100
1324 CA ASP 87 0.0064 15.4746 14.6100
1336 CA ASN 88 0.0069 15.7840 17.7900
1350 CA ILE 89 0.0026 13.1709 12.7000
1369 CA ALA 90 0.0047 14.4358 11.8800
1379 CA ASP 91 0.0040 14.0074 13.0600
1391 CA ALA 92 0.0021 12.8925 12.9200
1401 CA VAL 93 0.0023 13.0395 11.5800
1417 CA ALA 94 0.0030 13.4333 14.0300
1427 CA CYS 95 0.0022 12.9595 11.4600
1437 CA ALA 96 0.0018 12.7302 11.0900
1447 CA LYS 97 0.0026 13.1785 11.6700
1469 CA ARG 98 0.0033 13.6078 12.8700
1493 CA VAL 99 0.0023 12.9927 12.3300
1509 CA VAL 100 0.0026 13.1868 12.6500
1525 CA ARG 101 0.0052 14.7361 17.7800
1549 CA ASP 102 0.0068 15.6943 18.6000
1561 CA PRO 103 0.0215 24.4603 24.3900
1575 CA GLN 104 0.0101 17.6830 21.2300
1592 CA GLY 105 0.0043 14.2110 17.9100
1599 CA ILE 106 0.0025 13.1432 17.1100
1618 CA ARG 107 0.0051 14.6884 17.1300
1642 CA ALA 108 0.0048 14.4972 21.5800
1652 CA TRP 109 0.0033 13.6293 16.7900
1676 CA VAL 110 0.0092 17.1364 20.7700
1692 CA ALA 111 0.0055 14.9141 20.0800
1702 CA TRP 112 0.0034 13.6535 14.2700
1726 CA ARG 113 0.0070 15.8039 16.4300
1750 CA ASN 114 0.0109 18.1824 17.9900
1764 CA ARG 115 0.0066 15.5695 17.3800
1788 CA CYS 116 0.0040 14.0569 14.6700
1798 CA GLN 117 0.0078 16.2730 18.2000
1815 CA ASN 118 0.0289 28.9040 28.5500
1829 CA ARG 119 0.0138 19.8806 29.4100
1853 CA ASP 120 0.0218 24.6801 27.3500
1865 CA VAL 121 0.0048 14.4954 21.1300
1881 CA ARG 122 0.0099 17.5778 27.6500
1905 CA GLN 123 0.0080 16.4215 28.1900
1922 CA TYR 124 0.0029 13.3776 20.5700
1943 CA VAL 125 0.0036 13.7612 19.0400
1959 CA GLN 126 0.0117 18.6453 29.0600
1976 CA GLY 127 0.0317 30.5677 25.3300
1983 CA CYS 128 0.0071 15.8695 20.3700
1993 CA GLY 129 0.0239 25.8949 29.2900
2000 CA VAL 130 0.0079 16.3743 25.2700

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 8th, 2025.

Should you encounter any unexpected behaviour, please let us know.